RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-223ENST00000588077 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
CACNA2D4-223ENST00000588077 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
CACNA2D4-223ENST00000588077 ABCC9O60706 1549 aa17.03■□□□□ 0.32
CACNA2D4-223ENST00000588077 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
CACNA2D4-223ENST00000588077 ZCCHC6Q5VYS8 1495 aaKnown RBP16.55■□□□□ 0.24
CACNA2D4-223ENST00000588077 NACADO15069 1562 aa16.37■□□□□ 0.21
CACNA2D4-223ENST00000588077 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
CACNA2D4-223ENST00000588077 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
CACNA2D4-223ENST00000588077 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
CACNA2D4-223ENST00000588077 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
CACNA2D4-223ENST00000588077 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
CACNA2D4-223ENST00000588077 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
CACNA2D4-223ENST00000588077 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
CACNA2D4-223ENST00000588077 MYT1Q01538 1121 aa15.97■□□□□ 0.15
CACNA2D4-223ENST00000588077 HRCP23327 699 aa15.92■□□□□ 0.14
CACNA2D4-223ENST00000588077 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
CACNA2D4-223ENST00000588077 PPARGC1BQ86YN6 1023 aaKnown RBP15.8■□□□□ 0.12
CACNA2D4-223ENST00000588077 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
CACNA2D4-223ENST00000588077 PCGF6Q9BYE7 350 aa15.65■□□□□ 0.1
CACNA2D4-223ENST00000588077 SUPT5HO00267 1087 aaKnown RBP15.57■□□□□ 0.08
CACNA2D4-223ENST00000588077 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
CACNA2D4-223ENST00000588077 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
CACNA2D4-223ENST00000588077 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
CACNA2D4-223ENST00000588077 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
CACNA2D4-223ENST00000588077 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.04
CACNA2D4-223ENST00000588077 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
CACNA2D4-223ENST00000588077 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
CACNA2D4-223ENST00000588077 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.03
CACNA2D4-223ENST00000588077 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
CACNA2D4-223ENST00000588077 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
CACNA2D4-223ENST00000588077 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.03
CACNA2D4-223ENST00000588077 TTBK1Q5TCY1 1321 aaPredicted RBP15.19■□□□□ 0.02
CACNA2D4-223ENST00000588077 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
CACNA2D4-223ENST00000588077 WIZO95785 1651 aa15.15■□□□□ 0.02
CACNA2D4-223ENST00000588077 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
CACNA2D4-223ENST00000588077 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
CACNA2D4-223ENST00000588077 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
CACNA2D4-223ENST00000588077 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
CACNA2D4-223ENST00000588077 HMGXB3Q12766 1538 aa15.03■□□□□ -0
CACNA2D4-223ENST00000588077 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
CACNA2D4-223ENST00000588077 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
CACNA2D4-223ENST00000588077 PRKCSHP14314 528 aaPredicted RBP14.88□□□□□ -0.03
CACNA2D4-223ENST00000588077 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
CACNA2D4-223ENST00000588077 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
CACNA2D4-223ENST00000588077 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
CACNA2D4-223ENST00000588077 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
CACNA2D4-223ENST00000588077 NESP48681 1621 aa14.77□□□□□ -0.05
CACNA2D4-223ENST00000588077 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
CACNA2D4-223ENST00000588077 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
CACNA2D4-223ENST00000588077 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.06
CACNA2D4-223ENST00000588077 CFTRP13569 1480 aa14.68□□□□□ -0.06
CACNA2D4-223ENST00000588077 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
CACNA2D4-223ENST00000588077 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
CACNA2D4-223ENST00000588077 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
CACNA2D4-223ENST00000588077 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
CACNA2D4-223ENST00000588077 CENPBP07199 599 aaPredicted RBP14.63□□□□□ -0.07
CACNA2D4-223ENST00000588077 FANCD2Q9BXW9 1451 aa14.61□□□□□ -0.07
CACNA2D4-223ENST00000588077 ERICH6Q7L0X2 663 aa14.57□□□□□ -0.08
CACNA2D4-223ENST00000588077 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
CACNA2D4-223ENST00000588077 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
CACNA2D4-223ENST00000588077 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
CACNA2D4-223ENST00000588077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
CACNA2D4-223ENST00000588077 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.09
CACNA2D4-223ENST00000588077 ABCC8Q09428 1581 aa14.44□□□□□ -0.1
CACNA2D4-223ENST00000588077 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
CACNA2D4-223ENST00000588077 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
CACNA2D4-223ENST00000588077 TRIM41Q8WV44 630 aa14.43□□□□□ -0.1
CACNA2D4-223ENST00000588077 DIEXFQ68CQ4 756 aaKnown RBP14.43□□□□□ -0.1
CACNA2D4-223ENST00000588077 URB2Q14146 1524 aaKnown RBP14.4□□□□□ -0.1
CACNA2D4-223ENST00000588077 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
CACNA2D4-223ENST00000588077 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
CACNA2D4-223ENST00000588077 CCER1Q8TC90 406 aaPredicted RBP14.37□□□□□ -0.11
CACNA2D4-223ENST00000588077 APLP2Q06481 763 aa14.36□□□□□ -0.11
CACNA2D4-223ENST00000588077 CUX1P39880 1505 aa14.35□□□□□ -0.11
CACNA2D4-223ENST00000588077 THOC2Q8NI27 1593 aaKnown RBP14.34□□□□□ -0.11
CACNA2D4-223ENST00000588077 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
CACNA2D4-223ENST00000588077 WDR62O43379 1518 aa14.32□□□□□ -0.12
CACNA2D4-223ENST00000588077 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
CACNA2D4-223ENST00000588077 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
CACNA2D4-223ENST00000588077 SOGA1O94964 1423 aa14.29□□□□□ -0.12
CACNA2D4-223ENST00000588077 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
CACNA2D4-223ENST00000588077 CUX2O14529 1486 aa14.28□□□□□ -0.12
CACNA2D4-223ENST00000588077 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
CACNA2D4-223ENST00000588077 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.13
CACNA2D4-223ENST00000588077 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
CACNA2D4-223ENST00000588077 TDRD9Q8NDG6 1382 aaKnown RBP14.23□□□□□ -0.13
CACNA2D4-223ENST00000588077 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
CACNA2D4-223ENST00000588077 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
CACNA2D4-223ENST00000588077 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
CACNA2D4-223ENST00000588077 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
CACNA2D4-223ENST00000588077 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.141e-6■■■■□ 23.9
CACNA2D4-223ENST00000588077 FBLN2P98095 1184 aa14.13□□□□□ -0.15
CACNA2D4-223ENST00000588077 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
CACNA2D4-223ENST00000588077 ABCA10Q8WWZ4 1543 aa14.12□□□□□ -0.15
CACNA2D4-223ENST00000588077 TARBP1Q13395 1621 aaKnown RBP14.11□□□□□ -0.15
CACNA2D4-223ENST00000588077 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
CACNA2D4-223ENST00000588077 MIER1Q8N108 512 aa14.09□□□□□ -0.15
CACNA2D4-223ENST00000588077 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
CACNA2D4-223ENST00000588077 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
CACNA2D4-223ENST00000588077 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms