RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
RHBDL3-201ENST00000269051 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
RHBDL3-201ENST00000269051 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
RHBDL3-201ENST00000269051 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
RHBDL3-201ENST00000269051 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
RHBDL3-201ENST00000269051 ZEB1P37275 1124 aaPredicted RBP19.06■□□□□ 0.64
RHBDL3-201ENST00000269051 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
RHBDL3-201ENST00000269051 HRCP23327 699 aa19■□□□□ 0.63
RHBDL3-201ENST00000269051 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
RHBDL3-201ENST00000269051 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
RHBDL3-201ENST00000269051 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
RHBDL3-201ENST00000269051 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.6
RHBDL3-201ENST00000269051 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
RHBDL3-201ENST00000269051 CENPBP07199 599 aaPredicted RBP18.73■□□□□ 0.59
RHBDL3-201ENST00000269051 APLP2Q06481 763 aa18.65■□□□□ 0.58
RHBDL3-201ENST00000269051 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
RHBDL3-201ENST00000269051 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
RHBDL3-201ENST00000269051 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
RHBDL3-201ENST00000269051 MYT1Q01538 1121 aa18.46■□□□□ 0.55
RHBDL3-201ENST00000269051 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.54
RHBDL3-201ENST00000269051 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
RHBDL3-201ENST00000269051 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
RHBDL3-201ENST00000269051 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
RHBDL3-201ENST00000269051 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
RHBDL3-201ENST00000269051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
RHBDL3-201ENST00000269051 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
RHBDL3-201ENST00000269051 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
RHBDL3-201ENST00000269051 NEFLP07196 543 aa17.9■□□□□ 0.46
RHBDL3-201ENST00000269051 ERICH6Q7L0X2 663 aa17.9■□□□□ 0.46
RHBDL3-201ENST00000269051 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
RHBDL3-201ENST00000269051 GTF3C3Q9Y5Q9 886 aa17.77■□□□□ 0.43
RHBDL3-201ENST00000269051 ATP1B4Q9UN42 357 aaPredicted RBP17.74■□□□□ 0.43
RHBDL3-201ENST00000269051 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
RHBDL3-201ENST00000269051 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
RHBDL3-201ENST00000269051 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
RHBDL3-201ENST00000269051 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.4
RHBDL3-201ENST00000269051 ITGAEP38570 1179 aa17.57■□□□□ 0.4
RHBDL3-201ENST00000269051 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.39
RHBDL3-201ENST00000269051 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
RHBDL3-201ENST00000269051 ABCC9O60706 1549 aa17.43■□□□□ 0.38
RHBDL3-201ENST00000269051 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
RHBDL3-201ENST00000269051 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
RHBDL3-201ENST00000269051 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
RHBDL3-201ENST00000269051 RSF1Q96T23 1441 aaPredicted RBP17.24■□□□□ 0.35
RHBDL3-201ENST00000269051 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
RHBDL3-201ENST00000269051 BCANQ96GW7 911 aa17.2■□□□□ 0.34
RHBDL3-201ENST00000269051 ANP32CO43423 234 aa17.19■□□□□ 0.34
RHBDL3-201ENST00000269051 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
RHBDL3-201ENST00000269051 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
RHBDL3-201ENST00000269051 MIER1Q8N108 512 aa17.09■□□□□ 0.33
RHBDL3-201ENST00000269051 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
RHBDL3-201ENST00000269051 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
RHBDL3-201ENST00000269051 EEA1Q15075 1411 aa17.04■□□□□ 0.32
RHBDL3-201ENST00000269051 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
RHBDL3-201ENST00000269051 CEP162Q5TB80 1403 aa17.02■□□□□ 0.32
RHBDL3-201ENST00000269051 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
RHBDL3-201ENST00000269051 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
RHBDL3-201ENST00000269051 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
RHBDL3-201ENST00000269051 FKBP8Q14318 412 aa16.96■□□□□ 0.31
RHBDL3-201ENST00000269051 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.3
RHBDL3-201ENST00000269051 CLIP1P30622 1438 aa16.94■□□□□ 0.3
RHBDL3-201ENST00000269051 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
RHBDL3-201ENST00000269051 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
RHBDL3-201ENST00000269051 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
RHBDL3-201ENST00000269051 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
RHBDL3-201ENST00000269051 NACADO15069 1562 aa16.79■□□□□ 0.28
RHBDL3-201ENST00000269051 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
RHBDL3-201ENST00000269051 CEP164Q9UPV0 1460 aa16.76■□□□□ 0.27
RHBDL3-201ENST00000269051 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
RHBDL3-201ENST00000269051 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
RHBDL3-201ENST00000269051 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
RHBDL3-201ENST00000269051 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
RHBDL3-201ENST00000269051 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
RHBDL3-201ENST00000269051 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
RHBDL3-201ENST00000269051 ANP32EQ9BTT0 268 aa16.67■□□□□ 0.26
RHBDL3-201ENST00000269051 SUPT16HQ9Y5B9 1047 aaKnown RBP16.65■□□□□ 0.26
RHBDL3-201ENST00000269051 SOGA1O94964 1423 aa16.64■□□□□ 0.25
RHBDL3-201ENST00000269051 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
RHBDL3-201ENST00000269051 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
RHBDL3-201ENST00000269051 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
RHBDL3-201ENST00000269051 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
RHBDL3-201ENST00000269051 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
RHBDL3-201ENST00000269051 MRS2Q9HD23 443 aa16.52■□□□□ 0.24
RHBDL3-201ENST00000269051 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
RHBDL3-201ENST00000269051 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
RHBDL3-201ENST00000269051 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
RHBDL3-201ENST00000269051 EIF4G2P78344 907 aaKnown RBP eCLIP16.49■□□□□ 0.23
RHBDL3-201ENST00000269051 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
RHBDL3-201ENST00000269051 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
RHBDL3-201ENST00000269051 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
RHBDL3-201ENST00000269051 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
RHBDL3-201ENST00000269051 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
RHBDL3-201ENST00000269051 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
RHBDL3-201ENST00000269051 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
RHBDL3-201ENST00000269051 ARID3CA6NKF2 412 aa16.46■□□□□ 0.22
RHBDL3-201ENST00000269051 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
RHBDL3-201ENST00000269051 CHIC2Q9UKJ5 165 aa16.45■□□□□ 0.22
RHBDL3-201ENST00000269051 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
RHBDL3-201ENST00000269051 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
RHBDL3-201ENST00000269051 CCER2I3L3R5 266 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms