Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HMGCLP35914 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
HMGCLP35914 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HMGCLP35914 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMGCLP35914 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 HIST2H2BB-201ENST00000449108 381 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGCLP35914 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HMGCLP35914 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.78□□□□□ -0.04
HMGCLP35914 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGCLP35914 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.78□□□□□ -0.04
HMGCLP35914 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGCLP35914 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 AC097359.2-201ENST00000604992 2389 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
HMGCLP35914 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HMGCLP35914 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HMGCLP35914 MYADML-201ENST00000474610 2147 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HMGCLP35914 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 KHSRPP1-201ENST00000427983 1768 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGCLP35914 SHC1P1-201ENST00000425230 1745 ntBASIC14.78□□□□□ -0.04
HMGCLP35914 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 AC015688.4-201ENST00000580780 1647 ntBASIC14.77□□□□□ -0.04
HMGCLP35914 MYO15B-237ENST00000642007 4893 ntBASIC14.77□□□□□ -0.04
HMGCLP35914 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HMGCLP35914 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.77□□□□□ -0.04
HMGCLP35914 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.77□□□□□ -0.04
HMGCLP35914 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
HMGCLP35914 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HMGCLP35914 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.77□□□□□ -0.04
HMGCLP35914 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
HMGCLP35914 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMGCLP35914 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HMGCLP35914 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
HMGCLP35914 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.77□□□□□ -0.05
HMGCLP35914 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.77□□□□□ -0.05
HMGCLP35914 AC079178.1-201ENST00000420915 656 ntBASIC14.77□□□□□ -0.05
HMGCLP35914 AL035414.1-201ENST00000451327 857 ntBASIC14.77□□□□□ -0.05
HMGCLP35914 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
HMGCLP35914 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.77□□□□□ -0.05
HMGCLP35914 AL359881.2-201ENST00000602973 570 ntBASIC14.77□□□□□ -0.05
HMGCLP35914 AL136301.1-201ENST00000615830 422 ntBASIC14.77□□□□□ -0.05
HMGCLP35914 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
HMGCLP35914 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HMGCLP35914 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HMGCLP35914 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
HMGCLP35914 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
HMGCLP35914 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HMGCLP35914 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMGCLP35914 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 AC006504.5-208ENST00000588784 2401 ntBASIC14.76□□□□□ -0.05
HMGCLP35914 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.76□□□□□ -0.05
HMGCLP35914 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HMGCLP35914 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
HMGCLP35914 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms