Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA4Q9UN74 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHA4Q9UN74 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 AC015802.1-201ENST00000588104 1449 ntBASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 FAM21FP-201ENST00000426241 1131 ntBASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 RNA5SP412-201ENST00000516234 123 ntBASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 MIR4741-201ENST00000579822 90 ntBASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHA4Q9UN74 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
PCDHA4Q9UN74 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHA4Q9UN74 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHA4Q9UN74 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHA4Q9UN74 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 AC006504.5-208ENST00000588784 2401 ntBASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 MYADML-201ENST00000474610 2147 ntBASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 AC100850.1-201ENST00000506768 649 ntBASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 SHC1P1-201ENST00000425230 1745 ntBASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA4Q9UN74 KHSRPP1-201ENST00000427983 1768 ntBASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PCDHA4Q9UN74 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms