RNA–Protein interactions for RNA: ENST00000380498.10

CD68-202, Transcript of CD68 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD68, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD68-202ENST00000380498 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
CD68-202ENST00000380498 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
CD68-202ENST00000380498 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
CD68-202ENST00000380498 ABCC9O60706 1549 aa28.14■■■□□ 2.1
CD68-202ENST00000380498 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
CD68-202ENST00000380498 DCAF1Q9Y4B6 1507 aa27.97■■■□□ 2.07
CD68-202ENST00000380498 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
CD68-202ENST00000380498 NACADO15069 1562 aa27.57■■■□□ 2
CD68-202ENST00000380498 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
CD68-202ENST00000380498 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.97
CD68-202ENST00000380498 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
CD68-202ENST00000380498 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
CD68-202ENST00000380498 BICRAQ9NZM4 1560 aa26.68■■□□□ 1.86
CD68-202ENST00000380498 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
CD68-202ENST00000380498 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
CD68-202ENST00000380498 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
CD68-202ENST00000380498 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
CD68-202ENST00000380498 MROH2BQ7Z745 1585 aa26.17■■□□□ 1.78
CD68-202ENST00000380498 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
CD68-202ENST00000380498 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
CD68-202ENST00000380498 WIZO95785 1651 aa25.94■■□□□ 1.74
CD68-202ENST00000380498 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
CD68-202ENST00000380498 PEG3Q9GZU2 1588 aa25.77■■□□□ 1.72
CD68-202ENST00000380498 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
CD68-202ENST00000380498 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
CD68-202ENST00000380498 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
CD68-202ENST00000380498 CC2D2AQ9P2K1 1620 aa25.49■■□□□ 1.67
CD68-202ENST00000380498 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
CD68-202ENST00000380498 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
CD68-202ENST00000380498 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
CD68-202ENST00000380498 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
CD68-202ENST00000380498 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
CD68-202ENST00000380498 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.6
CD68-202ENST00000380498 CFTRP13569 1480 aa24.86■■□□□ 1.57
CD68-202ENST00000380498 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
CD68-202ENST00000380498 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
CD68-202ENST00000380498 TRIM41Q8WV44 630 aa24.76■■□□□ 1.55
CD68-202ENST00000380498 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
CD68-202ENST00000380498 NESP48681 1621 aa24.7■■□□□ 1.54
CD68-202ENST00000380498 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
CD68-202ENST00000380498 WRNQ14191 1432 aaPredicted RBP eCLIP24.59■■□□□ 1.53
CD68-202ENST00000380498 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
CD68-202ENST00000380498 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
CD68-202ENST00000380498 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
CD68-202ENST00000380498 CUX1P39880 1505 aa24.48■■□□□ 1.51
CD68-202ENST00000380498 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
CD68-202ENST00000380498 BIVM-ERCC5R4GMW8 1640 aa24.45■■□□□ 1.51
CD68-202ENST00000380498 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.5
CD68-202ENST00000380498 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
CD68-202ENST00000380498 SOGA1O94964 1423 aa24.28■■□□□ 1.48
CD68-202ENST00000380498 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
CD68-202ENST00000380498 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
CD68-202ENST00000380498 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
CD68-202ENST00000380498 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
CD68-202ENST00000380498 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
CD68-202ENST00000380498 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
CD68-202ENST00000380498 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.46
CD68-202ENST00000380498 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CD68-202ENST00000380498 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
CD68-202ENST00000380498 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
CD68-202ENST00000380498 EEA1Q15075 1411 aa24.12■■□□□ 1.45
CD68-202ENST00000380498 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
CD68-202ENST00000380498 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
CD68-202ENST00000380498 WDR62O43379 1518 aa24.05■■□□□ 1.44
CD68-202ENST00000380498 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
CD68-202ENST00000380498 KIF27Q86VH2 1401 aa24■■□□□ 1.43
CD68-202ENST00000380498 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
CD68-202ENST00000380498 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
CD68-202ENST00000380498 CUX2O14529 1486 aa23.97■■□□□ 1.43
CD68-202ENST00000380498 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
CD68-202ENST00000380498 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
CD68-202ENST00000380498 KIF21BO75037 1637 aa23.86■■□□□ 1.41
CD68-202ENST00000380498 IGF1RP08069 1367 aa23.85■■□□□ 1.41
CD68-202ENST00000380498 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
CD68-202ENST00000380498 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
CD68-202ENST00000380498 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
CD68-202ENST00000380498 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
CD68-202ENST00000380498 RAPGEF2Q9Y4G8 1499 aa23.78■■□□□ 1.4
CD68-202ENST00000380498 UBTFP17480 764 aaKnown RBP23.78■■□□□ 1.4
CD68-202ENST00000380498 GOLGA3Q08378 1498 aa23.77■■□□□ 1.4
CD68-202ENST00000380498 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
CD68-202ENST00000380498 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
CD68-202ENST00000380498 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
CD68-202ENST00000380498 AQRO60306 1485 aaKnown RBP eCLIP23.71■■□□□ 1.39
CD68-202ENST00000380498 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
CD68-202ENST00000380498 CARMIL1Q5VZK9 1371 aa23.67■■□□□ 1.38
CD68-202ENST00000380498 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
CD68-202ENST00000380498 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
CD68-202ENST00000380498 CUL7Q14999 1698 aa23.63■■□□□ 1.37
CD68-202ENST00000380498 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
CD68-202ENST00000380498 CEP162Q5TB80 1403 aa23.54■■□□□ 1.36
CD68-202ENST00000380498 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
CD68-202ENST00000380498 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
CD68-202ENST00000380498 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
CD68-202ENST00000380498 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
CD68-202ENST00000380498 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
CD68-202ENST00000380498 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
CD68-202ENST00000380498 CLIP1P30622 1438 aa23.39■■□□□ 1.33
CD68-202ENST00000380498 FBLN2P98095 1184 aa23.38■■□□□ 1.33
CD68-202ENST00000380498 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms