Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 OR8S1-201ENST00000310194 1080 ntBASIC16.11■□□□□ 0.17
SNRPFP62306 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SNRPFP62306 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 FAM58BP-201ENST00000439056 645 ntBASIC16.11■□□□□ 0.17
SNRPFP62306 KRT223P-202ENST00000449164 1292 ntBASIC16.11■□□□□ 0.17
SNRPFP62306 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.11■□□□□ 0.17
SNRPFP62306 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.11■□□□□ 0.17
SNRPFP62306 AP006547.1-201ENST00000563435 692 ntBASIC16.11■□□□□ 0.17
SNRPFP62306 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SNRPFP62306 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SNRPFP62306 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SNRPFP62306 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 AC005089.1-201ENST00000619486 2241 ntBASIC16.1■□□□□ 0.17
SNRPFP62306 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 MIR326-201ENST00000362220 95 ntBASIC16.1■□□□□ 0.17
SNRPFP62306 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SNRPFP62306 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.1■□□□□ 0.17
SNRPFP62306 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.1■□□□□ 0.17
SNRPFP62306 IGHV3-71-201ENST00000523324 359 ntBASIC16.1■□□□□ 0.17
SNRPFP62306 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 AC027237.1-201ENST00000560942 655 ntBASIC16.1■□□□□ 0.17
SNRPFP62306 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.1■□□□□ 0.17
SNRPFP62306 EEF1DP1-201ENST00000585891 896 ntBASIC16.1■□□□□ 0.17
SNRPFP62306 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 AL023775.1-201ENST00000454907 1746 ntBASIC16.1■□□□□ 0.17
SNRPFP62306 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.1■□□□□ 0.17
SNRPFP62306 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.1■□□□□ 0.17
SNRPFP62306 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNRPFP62306 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SNRPFP62306 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNRPFP62306 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms