Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.27□□□□□ -0.12
KRT20P35900 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT20P35900 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT20P35900 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT20P35900 DMBT1P1-203ENST00000636837 4628 ntBASIC14.27□□□□□ -0.12
KRT20P35900 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.27□□□□□ -0.12
KRT20P35900 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
KRT20P35900 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
KRT20P35900 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRT20P35900 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KRT20P35900 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT20P35900 SOCS2P1-201ENST00000417727 557 ntBASIC14.27□□□□□ -0.13
KRT20P35900 AL442647.2-201ENST00000429864 857 ntBASIC14.27□□□□□ -0.13
KRT20P35900 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KRT20P35900 VDAC1P7-201ENST00000462417 847 ntBASIC14.27□□□□□ -0.13
KRT20P35900 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT20P35900 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.27□□□□□ -0.13
KRT20P35900 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.27□□□□□ -0.13
KRT20P35900 AC133539.2-201ENST00000604757 467 ntBASIC14.27□□□□□ -0.13
KRT20P35900 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT20P35900 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT20P35900 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KRT20P35900 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.27□□□□□ -0.13
KRT20P35900 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
KRT20P35900 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
KRT20P35900 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.27□□□□□ -0.13
KRT20P35900 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
KRT20P35900 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT20P35900 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT20P35900 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
KRT20P35900 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KRT20P35900 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT20P35900 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.26□□□□□ -0.13
KRT20P35900 API5-211ENST00000534695 560 ntTSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT20P35900 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT20P35900 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT20P35900 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.26□□□□□ -0.13
KRT20P35900 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.26□□□□□ -0.13
KRT20P35900 AC093813.1-201ENST00000605066 256 ntBASIC14.26□□□□□ -0.13
KRT20P35900 AC008494.3-201ENST00000606615 944 ntBASIC14.26□□□□□ -0.13
KRT20P35900 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
KRT20P35900 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.26□□□□□ -0.13
KRT20P35900 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KRT20P35900 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KRT20P35900 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KRT20P35900 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.25□□□□□ -0.13
KRT20P35900 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.25□□□□□ -0.13
KRT20P35900 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
KRT20P35900 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.25□□□□□ -0.13
KRT20P35900 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KRT20P35900 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms