Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC139530.3-201ENST00000620344 690 ntBASIC12.23□□□□□ -0.45
DEFA4P12838 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
DEFA4P12838 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
DEFA4P12838 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
DEFA4P12838 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
DEFA4P12838 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.22□□□□□ -0.45
DEFA4P12838 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
DEFA4P12838 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 AL121723.1-201ENST00000445194 1519 ntBASIC12.22□□□□□ -0.45
DEFA4P12838 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.22□□□□□ -0.45
DEFA4P12838 FAM8A3P-201ENST00000427218 844 ntBASIC12.22□□□□□ -0.45
DEFA4P12838 RPL13P2-201ENST00000440687 659 ntBASIC12.22□□□□□ -0.45
DEFA4P12838 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.22□□□□□ -0.45
DEFA4P12838 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
DEFA4P12838 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.22□□□□□ -0.45
DEFA4P12838 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.22□□□□□ -0.45
DEFA4P12838 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 AL390754.1-201ENST00000619088 582 ntBASIC12.22□□□□□ -0.45
DEFA4P12838 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 AL137784.3-201ENST00000623858 2288 ntBASIC12.22□□□□□ -0.45
DEFA4P12838 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.22□□□□□ -0.45
DEFA4P12838 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
DEFA4P12838 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
DEFA4P12838 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.21□□□□□ -0.45
DEFA4P12838 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 CICP17-201ENST00000418553 2377 ntBASIC12.21□□□□□ -0.45
DEFA4P12838 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
DEFA4P12838 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
DEFA4P12838 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms