Protein–RNA interactions for Protein: Q9HAW4

CLSPN, Claspin, humanhuman

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPNQ9HAW4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 AC092933.1-201ENST00000393644 945 ntBASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 AL365209.1-201ENST00000624418 6473 ntBASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLSPNQ9HAW4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CLSPNQ9HAW4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CLSPNQ9HAW4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 INTS4P1-203ENST00000641008 3683 ntBASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 F10-203ENST00000409306 1450 ntTSL 3 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 SORD2P-201ENST00000558556 1069 ntBASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 AC020910.5-201ENST00000623668 1865 ntBASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLSPNQ9HAW4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC015688.4-201ENST00000580780 1647 ntBASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC007389.4-201ENST00000454674 793 ntBASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 RN7SL837P-201ENST00000463010 287 ntBASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC21.69■■□□□ 1.06
CLSPNQ9HAW4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms