Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDK5RAP2Q96SN8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDK5RAP2Q96SN8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 CCT8L1P-201ENST00000465400 1674 ntBASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AC067931.2-201ENST00000623655 2003 ntBASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AC011498.7-201ENST00000624986 2027 ntBASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 RN7SL832P-201ENST00000607781 1756 ntBASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AC005041.3-201ENST00000606287 649 ntBASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 AL591471.1-201ENST00000621855 229 ntBASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP2Q96SN8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 AL591122.2-201ENST00000624125 1853 ntBASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 AC078991.1-201ENST00000437297 610 ntBASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 SCARNA12-201ENST00000459155 270 ntBASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP2Q96SN8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 RPSAP31-201ENST00000416648 895 ntBASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms