RNA–Protein interactions for RNA: ENST00000351200.6

CABP1-203, Transcript of calcium binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CABP1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CABP1-203ENST00000351200 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
CABP1-203ENST00000351200 ABCC9O60706 1549 aa32.75■■■□□ 2.83
CABP1-203ENST00000351200 CCDC180Q9P1Z9 1646 aa32.19■■■□□ 2.74
CABP1-203ENST00000351200 DNAJC5BQ9UF47 199 aa31.18■■■□□ 2.58
CABP1-203ENST00000351200 RB1CC1Q8TDY2 1594 aa30.88■■■□□ 2.53
CABP1-203ENST00000351200 NACADO15069 1562 aa30.57■■■□□ 2.48
CABP1-203ENST00000351200 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
CABP1-203ENST00000351200 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
CABP1-203ENST00000351200 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
CABP1-203ENST00000351200 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
CABP1-203ENST00000351200 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
CABP1-203ENST00000351200 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
CABP1-203ENST00000351200 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
CABP1-203ENST00000351200 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
CABP1-203ENST00000351200 CC2D2AQ9P2K1 1620 aa29.52■■■□□ 2.32
CABP1-203ENST00000351200 DCAF1Q9Y4B6 1507 aa29.44■■■□□ 2.3
CABP1-203ENST00000351200 SCRIBQ14160 1630 aa29.38■■■□□ 2.29
CABP1-203ENST00000351200 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
CABP1-203ENST00000351200 DNAJC5Q9H3Z4 198 aa28.89■■■□□ 2.22
CABP1-203ENST00000351200 CUX2O14529 1486 aa28.35■■■□□ 2.13
CABP1-203ENST00000351200 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
CABP1-203ENST00000351200 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
CABP1-203ENST00000351200 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
CABP1-203ENST00000351200 NESP48681 1621 aa28.01■■■□□ 2.07
CABP1-203ENST00000351200 HMGXB3Q12766 1538 aa27.99■■■□□ 2.07
CABP1-203ENST00000351200 SMARCA2P51531 1590 aa27.97■■■□□ 2.07
CABP1-203ENST00000351200 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
CABP1-203ENST00000351200 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
CABP1-203ENST00000351200 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
CABP1-203ENST00000351200 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
CABP1-203ENST00000351200 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
CABP1-203ENST00000351200 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
CABP1-203ENST00000351200 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
CABP1-203ENST00000351200 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
CABP1-203ENST00000351200 PDS5BQ9NTI5 1447 aa27.52■■■□□ 2
CABP1-203ENST00000351200 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
CABP1-203ENST00000351200 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
CABP1-203ENST00000351200 MRC2Q9UBG0 1479 aa27.34■■□□□ 1.97
CABP1-203ENST00000351200 WDR62O43379 1518 aa27.29■■□□□ 1.96
CABP1-203ENST00000351200 WIZO95785 1651 aa27.17■■□□□ 1.94
CABP1-203ENST00000351200 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
CABP1-203ENST00000351200 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
CABP1-203ENST00000351200 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
CABP1-203ENST00000351200 CFTRP13569 1480 aa26.98■■□□□ 1.91
CABP1-203ENST00000351200 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
CABP1-203ENST00000351200 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
CABP1-203ENST00000351200 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
CABP1-203ENST00000351200 RIMBP3CA6NJZ7 1639 aa26.7■■□□□ 1.86
CABP1-203ENST00000351200 RIMBP3BA6NNM3 1639 aa26.7■■□□□ 1.86
CABP1-203ENST00000351200 RIMBP3Q9UFD9 1639 aa26.7■■□□□ 1.86
CABP1-203ENST00000351200 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
CABP1-203ENST00000351200 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
CABP1-203ENST00000351200 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
CABP1-203ENST00000351200 PRDM2Q13029 1718 aa26.57■■□□□ 1.84
CABP1-203ENST00000351200 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
CABP1-203ENST00000351200 TOPBP1Q92547 1522 aa26.52■■□□□ 1.84
CABP1-203ENST00000351200 EIF4G3O43432 1585 aaKnown RBP26.45■■□□□ 1.82
CABP1-203ENST00000351200 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
CABP1-203ENST00000351200 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
CABP1-203ENST00000351200 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
CABP1-203ENST00000351200 ABCC8Q09428 1581 aa26.35■■□□□ 1.81
CABP1-203ENST00000351200 CHD1O14646 1710 aa26.31■■□□□ 1.8
CABP1-203ENST00000351200 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
CABP1-203ENST00000351200 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
CABP1-203ENST00000351200 TRHP20396 242 aaPredicted RBP26.25■■□□□ 1.79
CABP1-203ENST00000351200 FBLN2P98095 1184 aa26.25■■□□□ 1.79
CABP1-203ENST00000351200 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
CABP1-203ENST00000351200 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
CABP1-203ENST00000351200 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
CABP1-203ENST00000351200 SOGA1O94964 1423 aa26.08■■□□□ 1.77
CABP1-203ENST00000351200 SNAPC4Q5SXM2 1469 aa26.06■■□□□ 1.76
CABP1-203ENST00000351200 CLASP1Q7Z460 1538 aa26.04■■□□□ 1.76
CABP1-203ENST00000351200 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
CABP1-203ENST00000351200 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
CABP1-203ENST00000351200 SYNJ1O43426 1573 aa25.94■■□□□ 1.74
CABP1-203ENST00000351200 MAGI1Q96QZ7 1491 aaPredicted RBP25.93■■□□□ 1.74
CABP1-203ENST00000351200 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
CABP1-203ENST00000351200 CUX1P39880 1505 aa25.91■■□□□ 1.74
CABP1-203ENST00000351200 GRIN2BQ13224 1484 aa25.9■■□□□ 1.74
CABP1-203ENST00000351200 SYNJ2O15056 1496 aa25.87■■□□□ 1.73
CABP1-203ENST00000351200 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
CABP1-203ENST00000351200 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
CABP1-203ENST00000351200 PBRM1Q86U86 1689 aa25.73■■□□□ 1.71
CABP1-203ENST00000351200 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
CABP1-203ENST00000351200 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
CABP1-203ENST00000351200 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
CABP1-203ENST00000351200 GRIN2AQ12879 1464 aa25.57■■□□□ 1.68
CABP1-203ENST00000351200 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
CABP1-203ENST00000351200 NUP160Q12769 1436 aa25.52■■□□□ 1.68
CABP1-203ENST00000351200 ADAMTS12P58397 1594 aa25.51■■□□□ 1.67
CABP1-203ENST00000351200 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
CABP1-203ENST00000351200 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
CABP1-203ENST00000351200 FHAD1B1AJZ9 1412 aa25.4■■□□□ 1.66
CABP1-203ENST00000351200 TOP2BQ02880 1626 aa25.32■■□□□ 1.64
CABP1-203ENST00000351200 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
CABP1-203ENST00000351200 KIF13AQ9H1H9 1805 aa25.32■■□□□ 1.64
CABP1-203ENST00000351200 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
CABP1-203ENST00000351200 ERICH3Q5RHP9 1530 aa25.3■■□□□ 1.64
CABP1-203ENST00000351200 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
CABP1-203ENST00000351200 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms