Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 AC023908.3-201ENST00000564211 3047 ntBASIC11.81□□□□□ -0.52
TRGV3P03979 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
TRGV3P03979 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
TRGV3P03979 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.81□□□□□ -0.52
TRGV3P03979 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.81□□□□□ -0.52
TRGV3P03979 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.81□□□□□ -0.52
TRGV3P03979 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
TRGV3P03979 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TRGV3P03979 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.81□□□□□ -0.52
TRGV3P03979 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRGV3P03979 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV3P03979 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 AJ011931.1-201ENST00000618749 2492 ntBASIC11.8□□□□□ -0.52
TRGV3P03979 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV3P03979 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 EIF3FP3-201ENST00000434851 1086 ntBASIC11.8□□□□□ -0.52
TRGV3P03979 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 AC234783.1-201ENST00000441761 496 ntBASIC11.8□□□□□ -0.52
TRGV3P03979 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.8□□□□□ -0.52
TRGV3P03979 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.8□□□□□ -0.52
TRGV3P03979 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TRGV3P03979 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRGV3P03979 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.8□□□□□ -0.52
TRGV3P03979 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.8□□□□□ -0.52
TRGV3P03979 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV3P03979 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV3P03979 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms