RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 NISCHQ9Y2I1 1504 aa35.97■■■■□ 3.35
CDRT15-202ENST00000431716 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
CDRT15-202ENST00000431716 ABCC9O60706 1549 aa31.38■■■□□ 2.61
CDRT15-202ENST00000431716 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
CDRT15-202ENST00000431716 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
CDRT15-202ENST00000431716 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
CDRT15-202ENST00000431716 NACADO15069 1562 aa29.95■■■□□ 2.39
CDRT15-202ENST00000431716 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
CDRT15-202ENST00000431716 DCAF1Q9Y4B6 1507 aa29.81■■■□□ 2.36
CDRT15-202ENST00000431716 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.3
CDRT15-202ENST00000431716 DNAJC5BQ9UF47 199 aa29.25■■■□□ 2.27
CDRT15-202ENST00000431716 UNC13AQ9UPW8 1703 aa29.15■■■□□ 2.26
CDRT15-202ENST00000431716 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
CDRT15-202ENST00000431716 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
CDRT15-202ENST00000431716 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
CDRT15-202ENST00000431716 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
CDRT15-202ENST00000431716 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
CDRT15-202ENST00000431716 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
CDRT15-202ENST00000431716 DNAJC5Q9H3Z4 198 aa27.99■■■□□ 2.07
CDRT15-202ENST00000431716 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
CDRT15-202ENST00000431716 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
CDRT15-202ENST00000431716 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.03
CDRT15-202ENST00000431716 NCAPD3P42695 1498 aa27.68■■■□□ 2.02
CDRT15-202ENST00000431716 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
CDRT15-202ENST00000431716 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
CDRT15-202ENST00000431716 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
CDRT15-202ENST00000431716 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
CDRT15-202ENST00000431716 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
CDRT15-202ENST00000431716 BAZ1BQ9UIG0 1483 aaKnown RBP27.45■■□□□ 1.99
CDRT15-202ENST00000431716 WIZO95785 1651 aa27.41■■□□□ 1.98
CDRT15-202ENST00000431716 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
CDRT15-202ENST00000431716 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
CDRT15-202ENST00000431716 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
CDRT15-202ENST00000431716 NESP48681 1621 aa27.05■■□□□ 1.92
CDRT15-202ENST00000431716 LAMC3Q9Y6N6 1575 aa26.92■■□□□ 1.9
CDRT15-202ENST00000431716 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
CDRT15-202ENST00000431716 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
CDRT15-202ENST00000431716 CCDC88BA6NC98 1476 aa26.86■■□□□ 1.89
CDRT15-202ENST00000431716 CUX2O14529 1486 aa26.79■■□□□ 1.88
CDRT15-202ENST00000431716 CFTRP13569 1480 aa26.67■■□□□ 1.86
CDRT15-202ENST00000431716 KIF21AQ7Z4S6 1674 aa26.61■■□□□ 1.85
CDRT15-202ENST00000431716 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
CDRT15-202ENST00000431716 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
CDRT15-202ENST00000431716 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
CDRT15-202ENST00000431716 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
CDRT15-202ENST00000431716 PRDM2Q13029 1718 aa26.45■■□□□ 1.83
CDRT15-202ENST00000431716 WDR62O43379 1518 aa26.39■■□□□ 1.82
CDRT15-202ENST00000431716 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
CDRT15-202ENST00000431716 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
CDRT15-202ENST00000431716 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
CDRT15-202ENST00000431716 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
CDRT15-202ENST00000431716 DNMBPQ6XZF7 1577 aa26.04■■□□□ 1.76
CDRT15-202ENST00000431716 IFT140Q96RY7 1462 aa26.01■■□□□ 1.75
CDRT15-202ENST00000431716 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
CDRT15-202ENST00000431716 CUX1P39880 1505 aa25.97■■□□□ 1.75
CDRT15-202ENST00000431716 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
CDRT15-202ENST00000431716 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
CDRT15-202ENST00000431716 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
CDRT15-202ENST00000431716 SOGA1O94964 1423 aa25.85■■□□□ 1.73
CDRT15-202ENST00000431716 SYNJ1O43426 1573 aa25.84■■□□□ 1.73
CDRT15-202ENST00000431716 BIVM-ERCC5R4GMW8 1640 aa25.84■■□□□ 1.73
CDRT15-202ENST00000431716 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.73
CDRT15-202ENST00000431716 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
CDRT15-202ENST00000431716 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
CDRT15-202ENST00000431716 AQRO60306 1485 aaKnown RBP eCLIP25.78■■□□□ 1.72
CDRT15-202ENST00000431716 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
CDRT15-202ENST00000431716 TDRD9Q8NDG6 1382 aaKnown RBP25.73■■□□□ 1.71
CDRT15-202ENST00000431716 EIF4G3O43432 1585 aaKnown RBP25.7■■□□□ 1.71
CDRT15-202ENST00000431716 FBLN2P98095 1184 aa25.64■■□□□ 1.7
CDRT15-202ENST00000431716 ABCA10Q8WWZ4 1543 aa25.62■■□□□ 1.69
CDRT15-202ENST00000431716 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
CDRT15-202ENST00000431716 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
CDRT15-202ENST00000431716 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
CDRT15-202ENST00000431716 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
CDRT15-202ENST00000431716 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
CDRT15-202ENST00000431716 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
CDRT15-202ENST00000431716 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.66
CDRT15-202ENST00000431716 MAGI1Q96QZ7 1491 aaPredicted RBP25.44■■□□□ 1.66
CDRT15-202ENST00000431716 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
CDRT15-202ENST00000431716 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
CDRT15-202ENST00000431716 CHD1O14646 1710 aa25.36■■□□□ 1.65
CDRT15-202ENST00000431716 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
CDRT15-202ENST00000431716 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
CDRT15-202ENST00000431716 IGF1RP08069 1367 aa25.28■■□□□ 1.64
CDRT15-202ENST00000431716 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
CDRT15-202ENST00000431716 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
CDRT15-202ENST00000431716 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.63
CDRT15-202ENST00000431716 EEA1Q15075 1411 aa25.2■■□□□ 1.63
CDRT15-202ENST00000431716 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
CDRT15-202ENST00000431716 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
CDRT15-202ENST00000431716 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
CDRT15-202ENST00000431716 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
CDRT15-202ENST00000431716 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
CDRT15-202ENST00000431716 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
CDRT15-202ENST00000431716 CUL7Q14999 1698 aa25.15■■□□□ 1.62
CDRT15-202ENST00000431716 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
CDRT15-202ENST00000431716 CARMIL1Q5VZK9 1371 aa25.14■■□□□ 1.61
CDRT15-202ENST00000431716 CSRNP3Q8WYN3 585 aa25.13■■□□□ 1.61
CDRT15-202ENST00000431716 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
CDRT15-202ENST00000431716 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms