Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ELL3Q9HB65 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ELL3Q9HB65 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AC087499.5-201ENST00000452760 1342 ntBASIC13.15□□□□□ -0.3
ELL3Q9HB65 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AL355385.1-201ENST00000606123 409 ntBASIC13.15□□□□□ -0.3
ELL3Q9HB65 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.15□□□□□ -0.3
ELL3Q9HB65 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ELL3Q9HB65 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.15□□□□□ -0.3
ELL3Q9HB65 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ELL3Q9HB65 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 UGT1A2P-201ENST00000454886 866 ntBASIC13.14□□□□□ -0.31
ELL3Q9HB65 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 AC004890.2-204ENST00000481968 304 ntBASIC13.14□□□□□ -0.31
ELL3Q9HB65 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ELL3Q9HB65 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.14□□□□□ -0.31
ELL3Q9HB65 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms