RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
GOPC-202ENST00000368498 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
GOPC-202ENST00000368498 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
GOPC-202ENST00000368498 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
GOPC-202ENST00000368498 PCGF6Q9BYE7 350 aa21.63■■□□□ 1.05
GOPC-202ENST00000368498 NISCHQ9Y2I1 1504 aa21.47■■□□□ 1.03
GOPC-202ENST00000368498 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.98
GOPC-202ENST00000368498 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.97
GOPC-202ENST00000368498 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
GOPC-202ENST00000368498 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.93
GOPC-202ENST00000368498 HRCP23327 699 aa20.76■□□□□ 0.91
GOPC-202ENST00000368498 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
GOPC-202ENST00000368498 YTHDC1Q96MU7 727 aaKnown RBP20.72■□□□□ 0.91
GOPC-202ENST00000368498 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
GOPC-202ENST00000368498 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
GOPC-202ENST00000368498 MYT1Q01538 1121 aa20.57■□□□□ 0.88
GOPC-202ENST00000368498 APLP2Q06481 763 aa20.57■□□□□ 0.88
GOPC-202ENST00000368498 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
GOPC-202ENST00000368498 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.86
GOPC-202ENST00000368498 TRIM41Q8WV44 630 aa20.39■□□□□ 0.86
GOPC-202ENST00000368498 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
GOPC-202ENST00000368498 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
GOPC-202ENST00000368498 NEFLP07196 543 aa20.12■□□□□ 0.81
GOPC-202ENST00000368498 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
GOPC-202ENST00000368498 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
GOPC-202ENST00000368498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
GOPC-202ENST00000368498 GTF3C3Q9Y5Q9 886 aa19.92■□□□□ 0.78
GOPC-202ENST00000368498 DIEXFQ68CQ4 756 aaKnown RBP19.9■□□□□ 0.78
GOPC-202ENST00000368498 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
GOPC-202ENST00000368498 HNRNPUL2Q1KMD3 747 aaKnown RBP19.78■□□□□ 0.76
GOPC-202ENST00000368498 ITGAEP38570 1179 aa19.69■□□□□ 0.74
GOPC-202ENST00000368498 BCANQ96GW7 911 aa19.62■□□□□ 0.73
GOPC-202ENST00000368498 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
GOPC-202ENST00000368498 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
GOPC-202ENST00000368498 POLR3GLQ9BT43 218 aa19.43■□□□□ 0.7
GOPC-202ENST00000368498 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
GOPC-202ENST00000368498 DAXXQ9UER7 740 aaPredicted RBP19.37■□□□□ 0.69
GOPC-202ENST00000368498 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
GOPC-202ENST00000368498 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
GOPC-202ENST00000368498 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
GOPC-202ENST00000368498 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
GOPC-202ENST00000368498 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
GOPC-202ENST00000368498 FKBP8Q14318 412 aa18.97■□□□□ 0.63
GOPC-202ENST00000368498 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
GOPC-202ENST00000368498 ANP32CO43423 234 aa18.94■□□□□ 0.62
GOPC-202ENST00000368498 EIF5BO60841 1220 aaKnown RBP18.88■□□□□ 0.61
GOPC-202ENST00000368498 MIER1Q8N108 512 aa18.84■□□□□ 0.61
GOPC-202ENST00000368498 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
GOPC-202ENST00000368498 NBR1Q14596 966 aa18.74■□□□□ 0.59
GOPC-202ENST00000368498 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
GOPC-202ENST00000368498 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
GOPC-202ENST00000368498 ANP32AP39687 249 aaKnown RBP18.7■□□□□ 0.58
GOPC-202ENST00000368498 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
GOPC-202ENST00000368498 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
GOPC-202ENST00000368498 SLC4A1APQ9BWU0 796 aaKnown RBP18.66■□□□□ 0.58
GOPC-202ENST00000368498 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
GOPC-202ENST00000368498 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
GOPC-202ENST00000368498 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
GOPC-202ENST00000368498 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
GOPC-202ENST00000368498 ANP32EQ9BTT0 268 aa18.58■□□□□ 0.56
GOPC-202ENST00000368498 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
GOPC-202ENST00000368498 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
GOPC-202ENST00000368498 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
GOPC-202ENST00000368498 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.56
GOPC-202ENST00000368498 SALL2Q9Y467 1007 aaPredicted RBP18.46■□□□□ 0.55
GOPC-202ENST00000368498 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
GOPC-202ENST00000368498 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
GOPC-202ENST00000368498 ARXQ96QS3 562 aa18.42■□□□□ 0.54
GOPC-202ENST00000368498 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.54
GOPC-202ENST00000368498 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
GOPC-202ENST00000368498 RTN4Q9NQC3 1192 aaKnown RBP18.34■□□□□ 0.53
GOPC-202ENST00000368498 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
GOPC-202ENST00000368498 ARID3CA6NKF2 412 aa18.33■□□□□ 0.53
GOPC-202ENST00000368498 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.52
GOPC-202ENST00000368498 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
GOPC-202ENST00000368498 TONSLQ96HA7 1378 aa18.26■□□□□ 0.51
GOPC-202ENST00000368498 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
GOPC-202ENST00000368498 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
GOPC-202ENST00000368498 TMC1Q8TDI8 760 aa18.15■□□□□ 0.5
GOPC-202ENST00000368498 HSP90AA1P07900 732 aaKnown RBP18.11■□□□□ 0.49
GOPC-202ENST00000368498 RBM19Q9Y4C8 960 aaKnown RBP18.11■□□□□ 0.49
GOPC-202ENST00000368498 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
GOPC-202ENST00000368498 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
GOPC-202ENST00000368498 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
GOPC-202ENST00000368498 ANP32BQ92688 251 aaKnown RBP18.06■□□□□ 0.48
GOPC-202ENST00000368498 ZNF777Q9ULD5 760 aaPredicted RBP18.05■□□□□ 0.48
GOPC-202ENST00000368498 DEKP35659 375 aaKnown RBP18.04■□□□□ 0.48
GOPC-202ENST00000368498 B4GALNT3Q6L9W6 998 aa18.04■□□□□ 0.48
GOPC-202ENST00000368498 UPF2Q9HAU5 1272 aaKnown RBP18.04■□□□□ 0.48
GOPC-202ENST00000368498 TSHZ2Q9NRE2 1034 aa18.04■□□□□ 0.48
GOPC-202ENST00000368498 NEFMP07197 916 aa18.03■□□□□ 0.48
GOPC-202ENST00000368498 CCDC180Q9P1Z9 1646 aa18.01■□□□□ 0.47
GOPC-202ENST00000368498 ABCC9O60706 1549 aa17.99■□□□□ 0.47
GOPC-202ENST00000368498 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
GOPC-202ENST00000368498 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
GOPC-202ENST00000368498 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
GOPC-202ENST00000368498 KDM2AQ9Y2K7 1162 aa17.92■□□□□ 0.46
GOPC-202ENST00000368498 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
GOPC-202ENST00000368498 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.466e-6■■■■□ 25.1
GOPC-202ENST00000368498 FBLN2P98095 1184 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms