RNA–Protein interactions for RNA: ENST00000429115.1

WDR53-203, Transcript of WD repeat domain 53, humanhuman

TSL 2 BASIC

Gene WDR53, Length 683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR53-203ENST00000429115 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
WDR53-203ENST00000429115 ABCC9O60706 1549 aa37.66■■■■□ 3.62
WDR53-203ENST00000429115 CCDC180Q9P1Z9 1646 aa36.95■■■■□ 3.51
WDR53-203ENST00000429115 DNAJC5BQ9UF47 199 aa35.68■■■■□ 3.3
WDR53-203ENST00000429115 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
WDR53-203ENST00000429115 DCAF8L2P0C7V8 631 aa35.07■■■■□ 3.2
WDR53-203ENST00000429115 NACADO15069 1562 aa35.04■■■■□ 3.2
WDR53-203ENST00000429115 PABPN1Q86U42 306 aaKnown RBP eCLIP35■■■■□ 3.19
WDR53-203ENST00000429115 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
WDR53-203ENST00000429115 BICRAQ9NZM4 1560 aa34.44■■■■□ 3.1
WDR53-203ENST00000429115 MYO15BQ96JP2 1530 aa34.24■■■■□ 3.07
WDR53-203ENST00000429115 CC2D2AQ9P2K1 1620 aa33.91■■■■□ 3.02
WDR53-203ENST00000429115 CECR2Q9BXF3 1484 aa33.9■■■■□ 3.02
WDR53-203ENST00000429115 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
WDR53-203ENST00000429115 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
WDR53-203ENST00000429115 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
WDR53-203ENST00000429115 EIF4G1Q04637 1599 aaKnown RBP33.68■■■□□ 2.98
WDR53-203ENST00000429115 DCAF1Q9Y4B6 1507 aa33.66■■■□□ 2.98
WDR53-203ENST00000429115 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
WDR53-203ENST00000429115 ERCC6Q03468 1493 aa32.55■■■□□ 2.8
WDR53-203ENST00000429115 CUX2O14529 1486 aa32.5■■■□□ 2.79
WDR53-203ENST00000429115 NCAPD3P42695 1498 aa32.32■■■□□ 2.76
WDR53-203ENST00000429115 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
WDR53-203ENST00000429115 NESP48681 1621 aa32.18■■■□□ 2.74
WDR53-203ENST00000429115 SMARCA4P51532 1647 aa32.11■■■□□ 2.73
WDR53-203ENST00000429115 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
WDR53-203ENST00000429115 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
WDR53-203ENST00000429115 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
WDR53-203ENST00000429115 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.7
WDR53-203ENST00000429115 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
WDR53-203ENST00000429115 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
WDR53-203ENST00000429115 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
WDR53-203ENST00000429115 TRIM41Q8WV44 630 aa31.68■■■□□ 2.66
WDR53-203ENST00000429115 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
WDR53-203ENST00000429115 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
WDR53-203ENST00000429115 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
WDR53-203ENST00000429115 MRC2Q9UBG0 1479 aa31.4■■■□□ 2.62
WDR53-203ENST00000429115 CADPSQ9ULU8 1353 aa31.38■■■□□ 2.61
WDR53-203ENST00000429115 WDR62O43379 1518 aa31.29■■■□□ 2.6
WDR53-203ENST00000429115 WIZO95785 1651 aa31.27■■■□□ 2.6
WDR53-203ENST00000429115 CEP164Q9UPV0 1460 aa31.2■■■□□ 2.58
WDR53-203ENST00000429115 FANCD2Q9BXW9 1451 aa31.1■■■□□ 2.57
WDR53-203ENST00000429115 OSCARQ8IYS5 282 aa30.96■■■□□ 2.55
WDR53-203ENST00000429115 CFTRP13569 1480 aa30.89■■■□□ 2.53
WDR53-203ENST00000429115 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
WDR53-203ENST00000429115 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
WDR53-203ENST00000429115 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
WDR53-203ENST00000429115 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
WDR53-203ENST00000429115 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
WDR53-203ENST00000429115 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
WDR53-203ENST00000429115 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
WDR53-203ENST00000429115 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
WDR53-203ENST00000429115 IFT140Q96RY7 1462 aa30.53■■■□□ 2.48
WDR53-203ENST00000429115 ARHGEF11O15085 1522 aa30.52■■■□□ 2.48
WDR53-203ENST00000429115 TOPBP1Q92547 1522 aa30.44■■■□□ 2.46
WDR53-203ENST00000429115 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
WDR53-203ENST00000429115 EIF4G3O43432 1585 aaKnown RBP30.42■■■□□ 2.46
WDR53-203ENST00000429115 CYB5RLQ6IPT4 315 aa30.38■■■□□ 2.45
WDR53-203ENST00000429115 CHD1O14646 1710 aa30.32■■■□□ 2.44
WDR53-203ENST00000429115 FBLN2P98095 1184 aa30.3■■■□□ 2.44
WDR53-203ENST00000429115 TRHP20396 242 aaPredicted RBP30.29■■■□□ 2.44
WDR53-203ENST00000429115 AQRO60306 1485 aaKnown RBP eCLIP30.28■■■□□ 2.44
WDR53-203ENST00000429115 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
WDR53-203ENST00000429115 ABCC8Q09428 1581 aa30.22■■■□□ 2.43
WDR53-203ENST00000429115 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
WDR53-203ENST00000429115 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
WDR53-203ENST00000429115 POLA1P09884 1462 aaPredicted RBP30.1■■■□□ 2.41
WDR53-203ENST00000429115 RAD54L2Q9Y4B4 1467 aa30.07■■■□□ 2.4
WDR53-203ENST00000429115 TDRD9Q8NDG6 1382 aaKnown RBP30.02■■■□□ 2.4
WDR53-203ENST00000429115 SNAPC4Q5SXM2 1469 aa29.98■■■□□ 2.39
WDR53-203ENST00000429115 SOGA1O94964 1423 aa29.96■■■□□ 2.39
WDR53-203ENST00000429115 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
WDR53-203ENST00000429115 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
WDR53-203ENST00000429115 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
WDR53-203ENST00000429115 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
WDR53-203ENST00000429115 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
WDR53-203ENST00000429115 CUX1P39880 1505 aa29.76■■■□□ 2.35
WDR53-203ENST00000429115 MAGI1Q96QZ7 1491 aaPredicted RBP29.75■■■□□ 2.35
WDR53-203ENST00000429115 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
WDR53-203ENST00000429115 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
WDR53-203ENST00000429115 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
WDR53-203ENST00000429115 PBRM1Q86U86 1689 aa29.66■■■□□ 2.34
WDR53-203ENST00000429115 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
WDR53-203ENST00000429115 ERCC6L2Q5T890 1561 aa29.47■■■□□ 2.31
WDR53-203ENST00000429115 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
WDR53-203ENST00000429115 ABCA10Q8WWZ4 1543 aa29.41■■■□□ 2.3
WDR53-203ENST00000429115 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
WDR53-203ENST00000429115 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
WDR53-203ENST00000429115 CEP170Q5SW79 1584 aa29.32■■■□□ 2.28
WDR53-203ENST00000429115 NUP160Q12769 1436 aa29.23■■■□□ 2.27
WDR53-203ENST00000429115 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
WDR53-203ENST00000429115 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
WDR53-203ENST00000429115 SHROOM2Q13796 1616 aa29.16■■■□□ 2.26
WDR53-203ENST00000429115 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
WDR53-203ENST00000429115 KIF13AQ9H1H9 1805 aa29.12■■■□□ 2.25
WDR53-203ENST00000429115 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
WDR53-203ENST00000429115 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
WDR53-203ENST00000429115 PRG4Q92954 1404 aaPredicted RBP29.08■■■□□ 2.25
WDR53-203ENST00000429115 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
WDR53-203ENST00000429115 FAM69CQ0P6D2 419 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms