Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.42■□□□□ 0.22
CTGFP29279 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CTGFP29279 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.42■□□□□ 0.22
CTGFP29279 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.42■□□□□ 0.22
CTGFP29279 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.42■□□□□ 0.22
CTGFP29279 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.42■□□□□ 0.22
CTGFP29279 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.42■□□□□ 0.22
CTGFP29279 IGHV1-12-201ENST00000518307 205 ntBASIC16.42■□□□□ 0.22
CTGFP29279 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.42■□□□□ 0.22
CTGFP29279 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.42■□□□□ 0.22
CTGFP29279 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.42■□□□□ 0.22
CTGFP29279 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 TRMT112P3-201ENST00000580149 358 ntBASIC16.42■□□□□ 0.22
CTGFP29279 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.42■□□□□ 0.22
CTGFP29279 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.42■□□□□ 0.22
CTGFP29279 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CTGFP29279 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTGFP29279 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.42■□□□□ 0.22
CTGFP29279 AC020658.6-201ENST00000623564 1870 ntBASIC16.42■□□□□ 0.22
CTGFP29279 AC067931.2-201ENST00000623655 2003 ntBASIC16.41■□□□□ 0.22
CTGFP29279 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.41■□□□□ 0.22
CTGFP29279 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CTGFP29279 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 PTGER4P2-201ENST00000328411 252 ntBASIC16.41■□□□□ 0.22
CTGFP29279 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CTGFP29279 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 PTGER4P3-201ENST00000458150 252 ntBASIC16.41■□□□□ 0.22
CTGFP29279 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.41■□□□□ 0.22
CTGFP29279 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.41■□□□□ 0.22
CTGFP29279 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.41■□□□□ 0.22
CTGFP29279 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.41■□□□□ 0.22
CTGFP29279 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.41■□□□□ 0.22
CTGFP29279 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.41■□□□□ 0.22
CTGFP29279 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.41■□□□□ 0.22
CTGFP29279 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 AL133467.4-201ENST00000602953 725 ntBASIC16.41■□□□□ 0.22
CTGFP29279 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.41■□□□□ 0.22
CTGFP29279 MIR6746-201ENST00000620971 63 ntBASIC16.41■□□□□ 0.22
CTGFP29279 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.41■□□□□ 0.22
CTGFP29279 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.41■□□□□ 0.22
CTGFP29279 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTGFP29279 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CTGFP29279 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTGFP29279 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CTGFP29279 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTGFP29279 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTGFP29279 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.4■□□□□ 0.22
CTGFP29279 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CTGFP29279 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.4■□□□□ 0.22
CTGFP29279 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms