Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC2P35250 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC2P35250 Z69890.1-201ENST00000382990 339 ntBASIC16.06■□□□□ 0.16
RFC2P35250 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RFC2P35250 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RFC2P35250 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC2P35250 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RFC2P35250 AP003398.1-201ENST00000531124 318 ntBASIC16.06■□□□□ 0.16
RFC2P35250 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 AL132780.4-201ENST00000624870 1135 ntBASIC16.06■□□□□ 0.16
RFC2P35250 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.06■□□□□ 0.16
RFC2P35250 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.06■□□□□ 0.16
RFC2P35250 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.06■□□□□ 0.16
RFC2P35250 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFC2P35250 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC2P35250 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RFC2P35250 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RFC2P35250 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 KRT18P36-201ENST00000411618 1276 ntBASIC16.05■□□□□ 0.16
RFC2P35250 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.05■□□□□ 0.16
RFC2P35250 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.05■□□□□ 0.16
RFC2P35250 NUDT4P2-201ENST00000578341 546 ntBASIC16.05■□□□□ 0.16
RFC2P35250 MIR4522-201ENST00000584932 87 ntBASIC16.05■□□□□ 0.16
RFC2P35250 AC007326.1-201ENST00000604539 458 ntBASIC16.05■□□□□ 0.16
RFC2P35250 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC2P35250 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC2P35250 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC2P35250 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.05■□□□□ 0.16
RFC2P35250 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RFC2P35250 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.05■□□□□ 0.16
RFC2P35250 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.04■□□□□ 0.16
RFC2P35250 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.04■□□□□ 0.16
RFC2P35250 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.04■□□□□ 0.16
RFC2P35250 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.04■□□□□ 0.16
RFC2P35250 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.04■□□□□ 0.16
RFC2P35250 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.04■□□□□ 0.16
RFC2P35250 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.04■□□□□ 0.16
RFC2P35250 PIN4P1-201ENST00000451079 396 ntBASIC16.04■□□□□ 0.16
RFC2P35250 KRT18P66-201ENST00000452970 1269 ntBASIC16.04■□□□□ 0.16
RFC2P35250 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 FTH1P22-201ENST00000456305 520 ntBASIC16.04■□□□□ 0.16
RFC2P35250 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.04■□□□□ 0.16
RFC2P35250 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RFC2P35250 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.04■□□□□ 0.16
RFC2P35250 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RFC2P35250 AP003680.1-201ENST00000598970 3660 ntBASIC16.04■□□□□ 0.16
RFC2P35250 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms