Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCN2BO60939 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCN2BO60939 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.23□□□□□ -0.13
SCN2BO60939 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SCN2BO60939 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SCN2BO60939 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SCN2BO60939 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 INTS4P2-202ENST00000614726 2019 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.22□□□□□ -0.13
SCN2BO60939 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.22□□□□□ -0.13
SCN2BO60939 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.22□□□□□ -0.13
SCN2BO60939 AC026434.2-201ENST00000506094 1078 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.22□□□□□ -0.13
SCN2BO60939 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.22□□□□□ -0.13
SCN2BO60939 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.22□□□□□ -0.13
SCN2BO60939 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.22□□□□□ -0.13
SCN2BO60939 AC124283.3-201ENST00000570869 594 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 AC005498.2-205ENST00000593218 784 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 AC007431.3-201ENST00000623221 587 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.22□□□□□ -0.13
SCN2BO60939 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 KRT8P22-201ENST00000562317 1415 ntBASIC14.22□□□□□ -0.13
SCN2BO60939 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SCN2BO60939 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SCN2BO60939 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SCN2BO60939 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 RNU1-114P-201ENST00000365297 166 ntBASIC14.21□□□□□ -0.13
SCN2BO60939 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 AC134915.1-201ENST00000426461 574 ntBASIC14.21□□□□□ -0.13
SCN2BO60939 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 AL512638.1-201ENST00000457493 794 ntBASIC14.21□□□□□ -0.13
SCN2BO60939 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.21□□□□□ -0.13
SCN2BO60939 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.21□□□□□ -0.13
SCN2BO60939 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.21□□□□□ -0.13
SCN2BO60939 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.21□□□□□ -0.13
SCN2BO60939 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
SCN2BO60939 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.21□□□□□ -0.13
SCN2BO60939 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SCN2BO60939 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SCN2BO60939 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms