Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 AC067930.6-201ENST00000623257 4947 ntBASIC11□□□□□ -0.65
MUC4Q99102 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 CLK3P2-201ENST00000427566 1453 ntBASIC11□□□□□ -0.65
MUC4Q99102 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 AL354702.1-201ENST00000442006 1960 ntBASIC11□□□□□ -0.65
MUC4Q99102 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11□□□□□ -0.65
MUC4Q99102 SPDYE18-201ENST00000510091 1050 ntBASIC11□□□□□ -0.65
MUC4Q99102 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11□□□□□ -0.65
MUC4Q99102 IGHV3-42-201ENST00000520410 361 ntBASIC11□□□□□ -0.65
MUC4Q99102 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
MUC4Q99102 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 RRP7BP-205ENST00000566851 833 ntBASIC11□□□□□ -0.65
MUC4Q99102 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
MUC4Q99102 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 API5-203ENST00000455725 2257 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11□□□□□ -0.65
MUC4Q99102 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
MUC4Q99102 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.99□□□□□ -0.65
MUC4Q99102 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
MUC4Q99102 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.99□□□□□ -0.65
MUC4Q99102 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
MUC4Q99102 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC10.99□□□□□ -0.65
MUC4Q99102 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.99□□□□□ -0.65
MUC4Q99102 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.99□□□□□ -0.65
MUC4Q99102 RAB43P1-201ENST00000561790 589 ntBASIC10.99□□□□□ -0.65
MUC4Q99102 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
MUC4Q99102 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
MUC4Q99102 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
MUC4Q99102 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
MUC4Q99102 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
MUC4Q99102 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms