RNA–Protein interactions for RNA: ENST00000359827.7

PLXNA4-202, Transcript of plexin A4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PLXNA4, Length 13,786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4-202ENST00000359827 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.76
PLXNA4-202ENST00000359827 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
PLXNA4-202ENST00000359827 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PLXNA4-202ENST00000359827 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
PLXNA4-202ENST00000359827 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
PLXNA4-202ENST00000359827 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.46
PLXNA4-202ENST00000359827 APLP2Q06481 763 aa17.85■□□□□ 0.45
PLXNA4-202ENST00000359827 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
PLXNA4-202ENST00000359827 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
PLXNA4-202ENST00000359827 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
PLXNA4-202ENST00000359827 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
PLXNA4-202ENST00000359827 MYT1Q01538 1121 aa17.56■□□□□ 0.4
PLXNA4-202ENST00000359827 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
PLXNA4-202ENST00000359827 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
PLXNA4-202ENST00000359827 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
PLXNA4-202ENST00000359827 CENPBP07199 599 aaPredicted RBP17.08■□□□□ 0.32
PLXNA4-202ENST00000359827 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
PLXNA4-202ENST00000359827 NEFLP07196 543 aa17.01■□□□□ 0.31
PLXNA4-202ENST00000359827 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
PLXNA4-202ENST00000359827 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
PLXNA4-202ENST00000359827 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
PLXNA4-202ENST00000359827 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
PLXNA4-202ENST00000359827 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
PLXNA4-202ENST00000359827 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
PLXNA4-202ENST00000359827 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
PLXNA4-202ENST00000359827 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
PLXNA4-202ENST00000359827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
PLXNA4-202ENST00000359827 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
PLXNA4-202ENST00000359827 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PLXNA4-202ENST00000359827 ITGAEP38570 1179 aa16.76■□□□□ 0.27
PLXNA4-202ENST00000359827 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
PLXNA4-202ENST00000359827 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
PLXNA4-202ENST00000359827 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
PLXNA4-202ENST00000359827 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
PLXNA4-202ENST00000359827 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
PLXNA4-202ENST00000359827 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
PLXNA4-202ENST00000359827 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
PLXNA4-202ENST00000359827 BCANQ96GW7 911 aa16.15■□□□□ 0.18
PLXNA4-202ENST00000359827 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
PLXNA4-202ENST00000359827 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
PLXNA4-202ENST00000359827 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
PLXNA4-202ENST00000359827 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
PLXNA4-202ENST00000359827 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
PLXNA4-202ENST00000359827 HRCP23327 699 aa16.09■□□□□ 0.17
PLXNA4-202ENST00000359827 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
PLXNA4-202ENST00000359827 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
PLXNA4-202ENST00000359827 FBLN2P98095 1184 aa15.97■□□□□ 0.15
PLXNA4-202ENST00000359827 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
PLXNA4-202ENST00000359827 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
PLXNA4-202ENST00000359827 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
PLXNA4-202ENST00000359827 NEFMP07197 916 aa15.84■□□□□ 0.13
PLXNA4-202ENST00000359827 ANP32CO43423 234 aa15.8■□□□□ 0.12
PLXNA4-202ENST00000359827 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
PLXNA4-202ENST00000359827 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
PLXNA4-202ENST00000359827 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
PLXNA4-202ENST00000359827 A0A0G2JS52 829 aa15.68■□□□□ 0.1
PLXNA4-202ENST00000359827 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
PLXNA4-202ENST00000359827 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
PLXNA4-202ENST00000359827 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
PLXNA4-202ENST00000359827 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
PLXNA4-202ENST00000359827 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
PLXNA4-202ENST00000359827 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
PLXNA4-202ENST00000359827 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
PLXNA4-202ENST00000359827 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
PLXNA4-202ENST00000359827 GLIPR1L2Q4G1C9 344 aa15.58■□□□□ 0.09
PLXNA4-202ENST00000359827 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.09
PLXNA4-202ENST00000359827 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
PLXNA4-202ENST00000359827 ANP32BQ92688 251 aaKnown RBP15.54■□□□□ 0.08
PLXNA4-202ENST00000359827 ANP32AP39687 249 aaKnown RBP15.53■□□□□ 0.08
PLXNA4-202ENST00000359827 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
PLXNA4-202ENST00000359827 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
PLXNA4-202ENST00000359827 ARXQ96QS3 562 aa15.5■□□□□ 0.07
PLXNA4-202ENST00000359827 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
PLXNA4-202ENST00000359827 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
PLXNA4-202ENST00000359827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
PLXNA4-202ENST00000359827 CDK11BP21127 795 aaKnown RBP15.36■□□□□ 0.05
PLXNA4-202ENST00000359827 ABCC9O60706 1549 aa15.35■□□□□ 0.05
PLXNA4-202ENST00000359827 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
PLXNA4-202ENST00000359827 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
PLXNA4-202ENST00000359827 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.05
PLXNA4-202ENST00000359827 NBR1Q14596 966 aa15.32■□□□□ 0.04
PLXNA4-202ENST00000359827 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
PLXNA4-202ENST00000359827 FKBP8Q14318 412 aa15.27■□□□□ 0.03
PLXNA4-202ENST00000359827 TPRNQ4KMQ1 711 aa15.26■□□□□ 0.03
PLXNA4-202ENST00000359827 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
PLXNA4-202ENST00000359827 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
PLXNA4-202ENST00000359827 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
PLXNA4-202ENST00000359827 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
PLXNA4-202ENST00000359827 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
PLXNA4-202ENST00000359827 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
PLXNA4-202ENST00000359827 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
PLXNA4-202ENST00000359827 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
PLXNA4-202ENST00000359827 TMC1Q8TDI8 760 aa15.17■□□□□ 0.02
PLXNA4-202ENST00000359827 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
PLXNA4-202ENST00000359827 MYH16Q9H6N6 1097 aa15.16■□□□□ 0.02
PLXNA4-202ENST00000359827 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
PLXNA4-202ENST00000359827 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
PLXNA4-202ENST00000359827 NPHP1O15259 732 aa15.13■□□□□ 0.01
PLXNA4-202ENST00000359827 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
PLXNA4-202ENST00000359827 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms