RNA–Protein interactions for RNA: ENST00000359827.7

PLXNA4-202, Transcript of plexin A4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PLXNA4, Length 13,786 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4-202ENST00000359827 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.76
PLXNA4-202ENST00000359827 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
PLXNA4-202ENST00000359827 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PLXNA4-202ENST00000359827 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
PLXNA4-202ENST00000359827 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
PLXNA4-202ENST00000359827 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.46
PLXNA4-202ENST00000359827 APLP2Q06481 763 aa17.85■□□□□ 0.45
PLXNA4-202ENST00000359827 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
PLXNA4-202ENST00000359827 FAM9AQ8IZU1 332 aaPredicted RBP17.66■□□□□ 0.42
PLXNA4-202ENST00000359827 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
PLXNA4-202ENST00000359827 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
PLXNA4-202ENST00000359827 MYT1Q01538 1121 aa17.56■□□□□ 0.4
PLXNA4-202ENST00000359827 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
PLXNA4-202ENST00000359827 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
PLXNA4-202ENST00000359827 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
PLXNA4-202ENST00000359827 CENPBP07199 599 aaPredicted RBP17.08■□□□□ 0.32
PLXNA4-202ENST00000359827 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
PLXNA4-202ENST00000359827 NEFLP07196 543 aa17.01■□□□□ 0.31
PLXNA4-202ENST00000359827 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
PLXNA4-202ENST00000359827 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
PLXNA4-202ENST00000359827 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
PLXNA4-202ENST00000359827 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
PLXNA4-202ENST00000359827 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
PLXNA4-202ENST00000359827 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
PLXNA4-202ENST00000359827 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
PLXNA4-202ENST00000359827 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
PLXNA4-202ENST00000359827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
PLXNA4-202ENST00000359827 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
PLXNA4-202ENST00000359827 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
PLXNA4-202ENST00000359827 ITGAEP38570 1179 aa16.76■□□□□ 0.27
PLXNA4-202ENST00000359827 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
PLXNA4-202ENST00000359827 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
PLXNA4-202ENST00000359827 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
PLXNA4-202ENST00000359827 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
PLXNA4-202ENST00000359827 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
PLXNA4-202ENST00000359827 RTL5Q5HYW3 569 aaPredicted RBP16.23■□□□□ 0.19
PLXNA4-202ENST00000359827 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
PLXNA4-202ENST00000359827 BCANQ96GW7 911 aa16.15■□□□□ 0.18
PLXNA4-202ENST00000359827 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
PLXNA4-202ENST00000359827 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
PLXNA4-202ENST00000359827 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
PLXNA4-202ENST00000359827 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
PLXNA4-202ENST00000359827 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
PLXNA4-202ENST00000359827 HRCP23327 699 aa16.09■□□□□ 0.17
PLXNA4-202ENST00000359827 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
PLXNA4-202ENST00000359827 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
PLXNA4-202ENST00000359827 FBLN2P98095 1184 aa15.97■□□□□ 0.15
PLXNA4-202ENST00000359827 CANXP27824 592 aaKnown RBP15.95■□□□□ 0.14
PLXNA4-202ENST00000359827 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
PLXNA4-202ENST00000359827 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
PLXNA4-202ENST00000359827 NEFMP07197 916 aa15.84■□□□□ 0.13
PLXNA4-202ENST00000359827 ANP32CO43423 234 aa15.8■□□□□ 0.12
PLXNA4-202ENST00000359827 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
PLXNA4-202ENST00000359827 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
PLXNA4-202ENST00000359827 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
PLXNA4-202ENST00000359827 A0A0G2JS52 829 aa15.68■□□□□ 0.1
PLXNA4-202ENST00000359827 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
PLXNA4-202ENST00000359827 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
PLXNA4-202ENST00000359827 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
PLXNA4-202ENST00000359827 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
PLXNA4-202ENST00000359827 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
PLXNA4-202ENST00000359827 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
PLXNA4-202ENST00000359827 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
PLXNA4-202ENST00000359827 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
PLXNA4-202ENST00000359827 GLIPR1L2Q4G1C9 344 aa15.58■□□□□ 0.09
PLXNA4-202ENST00000359827 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.09
PLXNA4-202ENST00000359827 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
PLXNA4-202ENST00000359827 ANP32BQ92688 251 aaKnown RBP15.54■□□□□ 0.08
PLXNA4-202ENST00000359827 ANP32AP39687 249 aaKnown RBP15.53■□□□□ 0.08
PLXNA4-202ENST00000359827 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
PLXNA4-202ENST00000359827 SALL2Q9Y467 1007 aaPredicted RBP15.52■□□□□ 0.08
PLXNA4-202ENST00000359827 ARXQ96QS3 562 aa15.5■□□□□ 0.07
PLXNA4-202ENST00000359827 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
PLXNA4-202ENST00000359827 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
PLXNA4-202ENST00000359827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
PLXNA4-202ENST00000359827 CDK11BP21127 795 aaKnown RBP15.36■□□□□ 0.05
PLXNA4-202ENST00000359827 ABCC9O60706 1549 aa15.35■□□□□ 0.05
PLXNA4-202ENST00000359827 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
PLXNA4-202ENST00000359827 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
PLXNA4-202ENST00000359827 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.05
PLXNA4-202ENST00000359827 NBR1Q14596 966 aa15.32■□□□□ 0.04
PLXNA4-202ENST00000359827 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
PLXNA4-202ENST00000359827 FKBP8Q14318 412 aa15.27■□□□□ 0.03
PLXNA4-202ENST00000359827 TPRNQ4KMQ1 711 aa15.26■□□□□ 0.03
PLXNA4-202ENST00000359827 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
PLXNA4-202ENST00000359827 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
PLXNA4-202ENST00000359827 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
PLXNA4-202ENST00000359827 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
PLXNA4-202ENST00000359827 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
PLXNA4-202ENST00000359827 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
PLXNA4-202ENST00000359827 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
PLXNA4-202ENST00000359827 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
PLXNA4-202ENST00000359827 TMC1Q8TDI8 760 aa15.17■□□□□ 0.02
PLXNA4-202ENST00000359827 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
PLXNA4-202ENST00000359827 MYH16Q9H6N6 1097 aa15.16■□□□□ 0.02
PLXNA4-202ENST00000359827 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
PLXNA4-202ENST00000359827 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
PLXNA4-202ENST00000359827 NPHP1O15259 732 aa15.13■□□□□ 0.01
PLXNA4-202ENST00000359827 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
PLXNA4-202ENST00000359827 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms