Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AGAP10P-201ENST00000454844 2418 ntBASIC13.48□□□□□ -0.25
VBP1P61758 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VBP1P61758 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
VBP1P61758 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 AC072061.1-201ENST00000569710 2234 ntBASIC13.47□□□□□ -0.25
VBP1P61758 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VBP1P61758 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 IGLL3P-201ENST00000412472 434 ntBASIC13.47□□□□□ -0.25
VBP1P61758 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.47□□□□□ -0.25
VBP1P61758 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.47□□□□□ -0.25
VBP1P61758 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.47□□□□□ -0.25
VBP1P61758 AC105233.2-201ENST00000523697 349 ntBASIC13.47□□□□□ -0.25
VBP1P61758 AF228730.5-201ENST00000530288 346 ntBASIC13.47□□□□□ -0.25
VBP1P61758 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.47□□□□□ -0.25
VBP1P61758 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.47□□□□□ -0.25
VBP1P61758 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.47□□□□□ -0.25
VBP1P61758 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VBP1P61758 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
VBP1P61758 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VBP1P61758 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.47□□□□□ -0.25
VBP1P61758 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VBP1P61758 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.46□□□□□ -0.25
VBP1P61758 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
VBP1P61758 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 AP002761.4-201ENST00000565433 3361 ntBASIC13.46□□□□□ -0.25
VBP1P61758 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.46□□□□□ -0.25
VBP1P61758 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.46□□□□□ -0.25
VBP1P61758 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.46□□□□□ -0.25
VBP1P61758 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.46□□□□□ -0.25
VBP1P61758 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.46□□□□□ -0.25
VBP1P61758 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.46□□□□□ -0.25
VBP1P61758 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.46□□□□□ -0.25
VBP1P61758 REXO1L6P-202ENST00000619970 1078 ntBASIC13.46□□□□□ -0.25
VBP1P61758 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VBP1P61758 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
VBP1P61758 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms