RNA–Protein interactions for RNA: ENST00000472837.5

GTF2IRD2B-203, Transcript of GTF2I repeat domain containing 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-203ENST00000472837 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
GTF2IRD2B-203ENST00000472837 SHROOM4Q9ULL8 1493 aa24.59■■□□□ 1.53
GTF2IRD2B-203ENST00000472837 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
GTF2IRD2B-203ENST00000472837 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
GTF2IRD2B-203ENST00000472837 ZCCHC6Q5VYS8 1495 aaKnown RBP23.29■■□□□ 1.32
GTF2IRD2B-203ENST00000472837 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
GTF2IRD2B-203ENST00000472837 CCDC180Q9P1Z9 1646 aa23.03■■□□□ 1.28
GTF2IRD2B-203ENST00000472837 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
GTF2IRD2B-203ENST00000472837 PCGF6Q9BYE7 350 aa22.91■■□□□ 1.26
GTF2IRD2B-203ENST00000472837 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
GTF2IRD2B-203ENST00000472837 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
GTF2IRD2B-203ENST00000472837 HRCP23327 699 aa22.59■■□□□ 1.21
GTF2IRD2B-203ENST00000472837 PPARGC1BQ86YN6 1023 aaKnown RBP22.56■■□□□ 1.2
GTF2IRD2B-203ENST00000472837 FAM9AQ8IZU1 332 aaPredicted RBP22.51■■□□□ 1.19
GTF2IRD2B-203ENST00000472837 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
GTF2IRD2B-203ENST00000472837 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
GTF2IRD2B-203ENST00000472837 DCAF1Q9Y4B6 1507 aa22.24■■□□□ 1.15
GTF2IRD2B-203ENST00000472837 ABCC9O60706 1549 aa22.15■■□□□ 1.14
GTF2IRD2B-203ENST00000472837 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
GTF2IRD2B-203ENST00000472837 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
GTF2IRD2B-203ENST00000472837 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
GTF2IRD2B-203ENST00000472837 TTBK1Q5TCY1 1321 aaPredicted RBP21.9■■□□□ 1.1
GTF2IRD2B-203ENST00000472837 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
GTF2IRD2B-203ENST00000472837 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
GTF2IRD2B-203ENST00000472837 WIZO95785 1651 aa21.55■■□□□ 1.04
GTF2IRD2B-203ENST00000472837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
GTF2IRD2B-203ENST00000472837 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
GTF2IRD2B-203ENST00000472837 NACADO15069 1562 aa21.47■■□□□ 1.03
GTF2IRD2B-203ENST00000472837 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
GTF2IRD2B-203ENST00000472837 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
GTF2IRD2B-203ENST00000472837 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
GTF2IRD2B-203ENST00000472837 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
GTF2IRD2B-203ENST00000472837 ABCC8Q09428 1581 aa21.3■■□□□ 1
GTF2IRD2B-203ENST00000472837 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
GTF2IRD2B-203ENST00000472837 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
GTF2IRD2B-203ENST00000472837 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
GTF2IRD2B-203ENST00000472837 SOGA1O94964 1423 aa21.16■□□□□ 0.98
GTF2IRD2B-203ENST00000472837 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
GTF2IRD2B-203ENST00000472837 RUSC2Q8N2Y8 1516 aa21.06■□□□□ 0.96
GTF2IRD2B-203ENST00000472837 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
GTF2IRD2B-203ENST00000472837 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
GTF2IRD2B-203ENST00000472837 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
GTF2IRD2B-203ENST00000472837 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
GTF2IRD2B-203ENST00000472837 DIEXFQ68CQ4 756 aaKnown RBP20.94■□□□□ 0.94
GTF2IRD2B-203ENST00000472837 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
GTF2IRD2B-203ENST00000472837 YTHDC1Q96MU7 727 aaKnown RBP20.88■□□□□ 0.93
GTF2IRD2B-203ENST00000472837 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
GTF2IRD2B-203ENST00000472837 APLP2Q06481 763 aa20.85■□□□□ 0.93
GTF2IRD2B-203ENST00000472837 NEUROD1Q13562 356 aa20.83■□□□□ 0.92
GTF2IRD2B-203ENST00000472837 TNIKQ9UKE5 1360 aa20.82■□□□□ 0.92
GTF2IRD2B-203ENST00000472837 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
GTF2IRD2B-203ENST00000472837 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
GTF2IRD2B-203ENST00000472837 PELP1Q8IZL8 1130 aaKnown RBP20.76■□□□□ 0.91
GTF2IRD2B-203ENST00000472837 ACIN1Q9UKV3 1341 aaKnown RBP20.71■□□□□ 0.91
GTF2IRD2B-203ENST00000472837 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
GTF2IRD2B-203ENST00000472837 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
GTF2IRD2B-203ENST00000472837 CLIP1P30622 1438 aa20.65■□□□□ 0.9
GTF2IRD2B-203ENST00000472837 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 BICRAQ9NZM4 1560 aa20.62■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 ITGAEP38570 1179 aa20.62■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 EEA1Q15075 1411 aa20.62■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
GTF2IRD2B-203ENST00000472837 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
GTF2IRD2B-203ENST00000472837 ATAD2BQ9ULI0 1458 aa20.54■□□□□ 0.88
GTF2IRD2B-203ENST00000472837 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
GTF2IRD2B-203ENST00000472837 MIER1Q8N108 512 aa20.51■□□□□ 0.87
GTF2IRD2B-203ENST00000472837 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
GTF2IRD2B-203ENST00000472837 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
GTF2IRD2B-203ENST00000472837 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
GTF2IRD2B-203ENST00000472837 P3H3Q8IVL6 736 aa20.33■□□□□ 0.84
GTF2IRD2B-203ENST00000472837 KIF21BO75037 1637 aa20.28■□□□□ 0.84
GTF2IRD2B-203ENST00000472837 PEG3Q9GZU2 1588 aa20.26■□□□□ 0.83
GTF2IRD2B-203ENST00000472837 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
GTF2IRD2B-203ENST00000472837 TOP2BQ02880 1626 aa20.14■□□□□ 0.82
GTF2IRD2B-203ENST00000472837 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
GTF2IRD2B-203ENST00000472837 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
GTF2IRD2B-203ENST00000472837 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
GTF2IRD2B-203ENST00000472837 CUX1P39880 1505 aa20.1■□□□□ 0.81
GTF2IRD2B-203ENST00000472837 PRXQ9BXM0 1461 aa20.07■□□□□ 0.8
GTF2IRD2B-203ENST00000472837 HIRIP3Q9BW71 556 aaPredicted RBP20.06■□□□□ 0.8
GTF2IRD2B-203ENST00000472837 CUX2O14529 1486 aa20.05■□□□□ 0.8
GTF2IRD2B-203ENST00000472837 CCNB3Q8WWL7 1395 aa20■□□□□ 0.79
GTF2IRD2B-203ENST00000472837 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
GTF2IRD2B-203ENST00000472837 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
GTF2IRD2B-203ENST00000472837 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
GTF2IRD2B-203ENST00000472837 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
GTF2IRD2B-203ENST00000472837 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 CARMIL1Q5VZK9 1371 aa19.93■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 IGF1RP08069 1367 aa19.93■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 CFTRP13569 1480 aa19.91■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
GTF2IRD2B-203ENST00000472837 BCANQ96GW7 911 aa19.88■□□□□ 0.77
GTF2IRD2B-203ENST00000472837 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
GTF2IRD2B-203ENST00000472837 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
GTF2IRD2B-203ENST00000472837 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.77
GTF2IRD2B-203ENST00000472837 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms