Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HIST1H1DP16402 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST1H1DP16402 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.75□□□□□ -0.37
HIST1H1DP16402 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 TUBB3P1-201ENST00000405796 1332 ntBASIC12.75□□□□□ -0.37
HIST1H1DP16402 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 AL353779.1-201ENST00000434793 351 ntBASIC12.75□□□□□ -0.37
HIST1H1DP16402 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 AC069262.1-201ENST00000539058 672 ntBASIC12.75□□□□□ -0.37
HIST1H1DP16402 TIMM17BP1-201ENST00000545713 516 ntBASIC12.75□□□□□ -0.37
HIST1H1DP16402 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 AL138828.2-201ENST00000615812 383 ntBASIC12.75□□□□□ -0.37
HIST1H1DP16402 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST1H1DP16402 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
HIST1H1DP16402 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 AL121894.2-201ENST00000602977 491 ntBASIC12.74□□□□□ -0.37
HIST1H1DP16402 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST1H1DP16402 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST1H1DP16402 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms