Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 LINC01230-201ENST00000625222 3017 ntBASIC13.56□□□□□ -0.24
HLA-DQA2P01906 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HLA-DQA2P01906 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 AL157414.3-201ENST00000624276 1954 ntBASIC13.55□□□□□ -0.24
HLA-DQA2P01906 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
HLA-DQA2P01906 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HLA-DQA2P01906 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms