RNA–Protein interactions for RNA: ENST00000294064.8

NEU3-201, Transcript of neuraminidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEU3, Length 6,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEU3-201ENST00000294064 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
NEU3-201ENST00000294064 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
NEU3-201ENST00000294064 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
NEU3-201ENST00000294064 EHMT2Q96KQ7 1210 aa21.46■■□□□ 1.03
NEU3-201ENST00000294064 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.93
NEU3-201ENST00000294064 ERICH6Q7L0X2 663 aa20.87■□□□□ 0.93
NEU3-201ENST00000294064 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.92
NEU3-201ENST00000294064 APLP2Q06481 763 aa20.7■□□□□ 0.9
NEU3-201ENST00000294064 PCGF6Q9BYE7 350 aa20.68■□□□□ 0.9
NEU3-201ENST00000294064 CENPBP07199 599 aaPredicted RBP20.56■□□□□ 0.88
NEU3-201ENST00000294064 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
NEU3-201ENST00000294064 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
NEU3-201ENST00000294064 YTHDC1Q96MU7 727 aaKnown RBP20.32■□□□□ 0.84
NEU3-201ENST00000294064 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
NEU3-201ENST00000294064 MYT1Q01538 1121 aa20.27■□□□□ 0.84
NEU3-201ENST00000294064 NEFLP07196 543 aa20.17■□□□□ 0.82
NEU3-201ENST00000294064 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
NEU3-201ENST00000294064 ATP1B4Q9UN42 357 aaPredicted RBP20.04■□□□□ 0.8
NEU3-201ENST00000294064 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
NEU3-201ENST00000294064 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.76
NEU3-201ENST00000294064 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
NEU3-201ENST00000294064 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
NEU3-201ENST00000294064 POLR3GLQ9BT43 218 aa19.59■□□□□ 0.73
NEU3-201ENST00000294064 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
NEU3-201ENST00000294064 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.72
NEU3-201ENST00000294064 HRCP23327 699 aa19.51■□□□□ 0.71
NEU3-201ENST00000294064 ITGAEP38570 1179 aa19.43■□□□□ 0.7
NEU3-201ENST00000294064 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
NEU3-201ENST00000294064 TRIM26Q12899 539 aaPredicted RBP19.37■□□□□ 0.69
NEU3-201ENST00000294064 ZNF316A6NFI3 1004 aaPredicted RBP19.29■□□□□ 0.68
NEU3-201ENST00000294064 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
NEU3-201ENST00000294064 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
NEU3-201ENST00000294064 MYT1LQ9UL68 1186 aa19.21■□□□□ 0.67
NEU3-201ENST00000294064 BCANQ96GW7 911 aa19.13■□□□□ 0.65
NEU3-201ENST00000294064 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
NEU3-201ENST00000294064 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
NEU3-201ENST00000294064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
NEU3-201ENST00000294064 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
NEU3-201ENST00000294064 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.65
NEU3-201ENST00000294064 GTF3C3Q9Y5Q9 886 aa18.98■□□□□ 0.63
NEU3-201ENST00000294064 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
NEU3-201ENST00000294064 CDK11AQ9UQ88 783 aaPredicted RBP18.81■□□□□ 0.6
NEU3-201ENST00000294064 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
NEU3-201ENST00000294064 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
NEU3-201ENST00000294064 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
NEU3-201ENST00000294064 ZBTB47Q9UFB7 747 aaPredicted RBP18.66■□□□□ 0.58
NEU3-201ENST00000294064 TRIM52Q96A61 297 aa18.64■□□□□ 0.58
NEU3-201ENST00000294064 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
NEU3-201ENST00000294064 NPM2Q86SE8 214 aaKnown RBP18.62■□□□□ 0.57
NEU3-201ENST00000294064 ANP32CO43423 234 aa18.61■□□□□ 0.57
NEU3-201ENST00000294064 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
NEU3-201ENST00000294064 CANXP27824 592 aaKnown RBP18.54■□□□□ 0.56
NEU3-201ENST00000294064 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
NEU3-201ENST00000294064 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
NEU3-201ENST00000294064 ANP32BQ92688 251 aaKnown RBP18.35■□□□□ 0.53
NEU3-201ENST00000294064 ARXQ96QS3 562 aa18.34■□□□□ 0.53
NEU3-201ENST00000294064 FKBP8Q14318 412 aa18.34■□□□□ 0.53
NEU3-201ENST00000294064 NBR1Q14596 966 aa18.33■□□□□ 0.52
NEU3-201ENST00000294064 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
NEU3-201ENST00000294064 GLIPR1L2Q4G1C9 344 aa18.3■□□□□ 0.52
NEU3-201ENST00000294064 NEFMP07197 916 aa18.24■□□□□ 0.51
NEU3-201ENST00000294064 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
NEU3-201ENST00000294064 HNRNPUQ00839 825 aaKnown RBP eCLIP18.12■□□□□ 0.49
NEU3-201ENST00000294064 UPF2Q9HAU5 1272 aaKnown RBP18.11■□□□□ 0.49
NEU3-201ENST00000294064 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
NEU3-201ENST00000294064 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
NEU3-201ENST00000294064 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
NEU3-201ENST00000294064 CCDC136Q96JN2 1154 aa18.02■□□□□ 0.48
NEU3-201ENST00000294064 DDX10Q13206 875 aaKnown RBP18.02■□□□□ 0.47
NEU3-201ENST00000294064 P3H3Q8IVL6 736 aa18.01■□□□□ 0.47
NEU3-201ENST00000294064 IRX6P78412 446 aaPredicted RBP18■□□□□ 0.47
NEU3-201ENST00000294064 FBLN2P98095 1184 aa17.98■□□□□ 0.47
NEU3-201ENST00000294064 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
NEU3-201ENST00000294064 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
NEU3-201ENST00000294064 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
NEU3-201ENST00000294064 CHGAP10645 457 aaKnown RBP17.85■□□□□ 0.45
NEU3-201ENST00000294064 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
NEU3-201ENST00000294064 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
NEU3-201ENST00000294064 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
NEU3-201ENST00000294064 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
NEU3-201ENST00000294064 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
NEU3-201ENST00000294064 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
NEU3-201ENST00000294064 CDK11BP21127 795 aaKnown RBP17.75■□□□□ 0.43
NEU3-201ENST00000294064 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
NEU3-201ENST00000294064 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
NEU3-201ENST00000294064 MIER1Q8N108 512 aa17.74■□□□□ 0.43
NEU3-201ENST00000294064 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
NEU3-201ENST00000294064 A0A0G2JS52 829 aa17.72■□□□□ 0.43
NEU3-201ENST00000294064 NCLP19338 710 aaKnown RBP17.71■□□□□ 0.43
NEU3-201ENST00000294064 WDR43Q15061 677 aaKnown RBP eCLIP17.71■□□□□ 0.43
NEU3-201ENST00000294064 TNNT2P45379 298 aaPredicted RBP17.7■□□□□ 0.42
NEU3-201ENST00000294064 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
NEU3-201ENST00000294064 DNTTIP2Q5QJE6 756 aaKnown RBP17.67■□□□□ 0.42
NEU3-201ENST00000294064 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
NEU3-201ENST00000294064 NAP1L5Q96NT1 182 aaPredicted RBP17.65■□□□□ 0.42
NEU3-201ENST00000294064 ANP32EQ9BTT0 268 aa17.64■□□□□ 0.41
NEU3-201ENST00000294064 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
NEU3-201ENST00000294064 BECN1Q14457 450 aa17.63■□□□□ 0.41
NEU3-201ENST00000294064 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
NEU3-201ENST00000294064 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms