Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
KIAA1549Q9HCM3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CYP46A4P-201ENST00000414953 267 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC091544.8-201ENST00000619490 361 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC097359.2-201ENST00000604992 2389 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AL157407.1-201ENST00000435784 904 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 BX284668.4-201ENST00000453917 508 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 BNIP3P13-201ENST00000599968 566 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 MBLAC2-202ENST00000514906 1936 ntBASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
KIAA1549Q9HCM3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 MARK2P5-201ENST00000507649 634 ntBASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.22□□□□□ -0.29
KIAA1549Q9HCM3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms