Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ATP1B3P54709 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 MIR943-201ENST00000401286 94 ntBASIC13.12□□□□□ -0.31
ATP1B3P54709 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.12□□□□□ -0.31
ATP1B3P54709 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ATP1B3P54709 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.12□□□□□ -0.31
ATP1B3P54709 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
ATP1B3P54709 AL359183.1-201ENST00000623796 2132 ntBASIC13.12□□□□□ -0.31
ATP1B3P54709 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
ATP1B3P54709 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ATP1B3P54709 CICP17-201ENST00000418553 2377 ntBASIC13.12□□□□□ -0.31
ATP1B3P54709 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ATP1B3P54709 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.11□□□□□ -0.31
ATP1B3P54709 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.11□□□□□ -0.31
ATP1B3P54709 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.11□□□□□ -0.31
ATP1B3P54709 AP001160.2-201ENST00000596071 487 ntBASIC13.11□□□□□ -0.31
ATP1B3P54709 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 AC093028.1-201ENST00000622998 982 ntBASIC13.11□□□□□ -0.31
ATP1B3P54709 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.11□□□□□ -0.31
ATP1B3P54709 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.11□□□□□ -0.31
ATP1B3P54709 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATP1B3P54709 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms