Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC025048.3-201ENST00000590609 569 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC138649.4-201ENST00000612222 287 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC093512.1-201ENST00000617969 520 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC005702.4-201ENST00000618393 416 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AC005562.1-201ENST00000583030 3219 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
HHLA3Q9XRX5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 SLED1-202ENST00000512051 380 ntBASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL512361.1-201ENST00000554200 418 ntBASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AC010336.2-201ENST00000564226 506 ntBASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AC074044.1-201ENST00000609673 707 ntBASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL390754.1-201ENST00000619088 582 ntBASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AL109936.8-201ENST00000641772 604 ntBASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ACE3P-201ENST00000423435 1973 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms