Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 HES2-206ENST00000489730 730 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 GUCY1A3-207ENST00000511108 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AF213884.3-201ENST00000563833 479 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AC126544.1-201ENST00000580842 1059 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AP001160.3-201ENST00000601484 763 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AC090643.2-201ENST00000623442 2029 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 KRT8P39-201ENST00000396270 1433 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 HOXB1-202ENST00000577092 1414 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 REXO1L4P-201ENST00000605109 1937 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RNF126P1-201ENST00000567452 1320 ntBASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 BOC-215ENST00000495514 4646 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDC42SE1Q9NRR8 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 MED24-212ENST00000501516 3037 ntTSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 KRT18P65-201ENST00000439811 1286 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AL031848.2-201ENST00000607670 837 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 MIR6724-1-201ENST00000616420 92 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 MIR6724-2-201ENST00000616483 92 ntBASIC7.49□□□□□ -1.21
CDC42SE1Q9NRR8 MIR6724-4-201ENST00000617390 92 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms