RNA–Protein interactions for RNA: ENST00000262623.3

ATP4A-201, Transcript of ATPase H+/K+ transporting subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP4A, Length 3,709 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4A-201ENST00000262623 NISCHQ9Y2I1 1504 aa23.34■■□□□ 1.33
ATP4A-201ENST00000262623 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
ATP4A-201ENST00000262623 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
ATP4A-201ENST00000262623 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
ATP4A-201ENST00000262623 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
ATP4A-201ENST00000262623 HRCP23327 699 aa20.22■□□□□ 0.83
ATP4A-201ENST00000262623 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
ATP4A-201ENST00000262623 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
ATP4A-201ENST00000262623 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
ATP4A-201ENST00000262623 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
ATP4A-201ENST00000262623 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.74
ATP4A-201ENST00000262623 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
ATP4A-201ENST00000262623 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
ATP4A-201ENST00000262623 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
ATP4A-201ENST00000262623 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
ATP4A-201ENST00000262623 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
ATP4A-201ENST00000262623 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
ATP4A-201ENST00000262623 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
ATP4A-201ENST00000262623 PELP1Q8IZL8 1130 aaKnown RBP19.22■□□□□ 0.67
ATP4A-201ENST00000262623 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
ATP4A-201ENST00000262623 TTBK1Q5TCY1 1321 aaPredicted RBP19.03■□□□□ 0.64
ATP4A-201ENST00000262623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
ATP4A-201ENST00000262623 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
ATP4A-201ENST00000262623 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
ATP4A-201ENST00000262623 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
ATP4A-201ENST00000262623 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
ATP4A-201ENST00000262623 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
ATP4A-201ENST00000262623 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
ATP4A-201ENST00000262623 YTHDC1Q96MU7 727 aaKnown RBP18.65■□□□□ 0.58
ATP4A-201ENST00000262623 GTF3C3Q9Y5Q9 886 aa18.64■□□□□ 0.57
ATP4A-201ENST00000262623 ABCC9O60706 1549 aa18.64■□□□□ 0.57
ATP4A-201ENST00000262623 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
ATP4A-201ENST00000262623 UBTFP17480 764 aaKnown RBP18.6■□□□□ 0.57
ATP4A-201ENST00000262623 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
ATP4A-201ENST00000262623 APLP2Q06481 763 aa18.45■□□□□ 0.54
ATP4A-201ENST00000262623 MYT1Q01538 1121 aa18.43■□□□□ 0.54
ATP4A-201ENST00000262623 RANGAP1P46060 587 aaPredicted RBP18.41■□□□□ 0.54
ATP4A-201ENST00000262623 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
ATP4A-201ENST00000262623 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
ATP4A-201ENST00000262623 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
ATP4A-201ENST00000262623 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
ATP4A-201ENST00000262623 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
ATP4A-201ENST00000262623 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
ATP4A-201ENST00000262623 MIER1Q8N108 512 aa18.13■□□□□ 0.49
ATP4A-201ENST00000262623 WIZO95785 1651 aa18.12■□□□□ 0.49
ATP4A-201ENST00000262623 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
ATP4A-201ENST00000262623 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
ATP4A-201ENST00000262623 NACADO15069 1562 aa18.04■□□□□ 0.48
ATP4A-201ENST00000262623 SOGA1O94964 1423 aa18.04■□□□□ 0.48
ATP4A-201ENST00000262623 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
ATP4A-201ENST00000262623 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
ATP4A-201ENST00000262623 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
ATP4A-201ENST00000262623 ITGAEP38570 1179 aa17.94■□□□□ 0.46
ATP4A-201ENST00000262623 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
ATP4A-201ENST00000262623 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
ATP4A-201ENST00000262623 EEA1Q15075 1411 aa17.92■□□□□ 0.46
ATP4A-201ENST00000262623 CLIP1P30622 1438 aa17.87■□□□□ 0.45
ATP4A-201ENST00000262623 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.45
ATP4A-201ENST00000262623 TOP2AP11388 1531 aaKnown RBP17.79■□□□□ 0.44
ATP4A-201ENST00000262623 BCANQ96GW7 911 aa17.76■□□□□ 0.43
ATP4A-201ENST00000262623 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
ATP4A-201ENST00000262623 NEFLP07196 543 aa17.74■□□□□ 0.43
ATP4A-201ENST00000262623 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
ATP4A-201ENST00000262623 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
ATP4A-201ENST00000262623 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
ATP4A-201ENST00000262623 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
ATP4A-201ENST00000262623 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
ATP4A-201ENST00000262623 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
ATP4A-201ENST00000262623 FAM50AQ14320 339 aaKnown RBP17.57■□□□□ 0.4
ATP4A-201ENST00000262623 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
ATP4A-201ENST00000262623 FKBP8Q14318 412 aa17.55■□□□□ 0.4
ATP4A-201ENST00000262623 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
ATP4A-201ENST00000262623 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
ATP4A-201ENST00000262623 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
ATP4A-201ENST00000262623 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
ATP4A-201ENST00000262623 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
ATP4A-201ENST00000262623 ANP32CO43423 234 aa17.45■□□□□ 0.38
ATP4A-201ENST00000262623 TSHZ2Q9NRE2 1034 aa17.45■□□□□ 0.38
ATP4A-201ENST00000262623 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
ATP4A-201ENST00000262623 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
ATP4A-201ENST00000262623 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
ATP4A-201ENST00000262623 TRIM52Q96A61 297 aa17.42■□□□□ 0.38
ATP4A-201ENST00000262623 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
ATP4A-201ENST00000262623 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
ATP4A-201ENST00000262623 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
ATP4A-201ENST00000262623 KIF21BO75037 1637 aa17.39■□□□□ 0.37
ATP4A-201ENST00000262623 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
ATP4A-201ENST00000262623 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
ATP4A-201ENST00000262623 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
ATP4A-201ENST00000262623 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
ATP4A-201ENST00000262623 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
ATP4A-201ENST00000262623 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
ATP4A-201ENST00000262623 CDK11AQ9UQ88 783 aaPredicted RBP17.23■□□□□ 0.35
ATP4A-201ENST00000262623 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATP4A-201ENST00000262623 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
ATP4A-201ENST00000262623 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
ATP4A-201ENST00000262623 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
ATP4A-201ENST00000262623 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
ATP4A-201ENST00000262623 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
ATP4A-201ENST00000262623 RRBP1Q9P2E9 1410 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms