RNA–Protein interactions for RNA: ENST00000452840.5

LINC01122-207, Transcript of long intergenic non-protein coding RNA 1122, humanhuman

TSL 5 BASIC

Gene LINC01122, Length 4,077 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01122-207ENST00000452840 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
LINC01122-207ENST00000452840 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
LINC01122-207ENST00000452840 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
LINC01122-207ENST00000452840 HRCP23327 699 aa20.41■□□□□ 0.86
LINC01122-207ENST00000452840 PCGF6Q9BYE7 350 aa20.12■□□□□ 0.81
LINC01122-207ENST00000452840 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.79
LINC01122-207ENST00000452840 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.79
LINC01122-207ENST00000452840 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
LINC01122-207ENST00000452840 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
LINC01122-207ENST00000452840 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
LINC01122-207ENST00000452840 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
LINC01122-207ENST00000452840 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
LINC01122-207ENST00000452840 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
LINC01122-207ENST00000452840 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
LINC01122-207ENST00000452840 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
LINC01122-207ENST00000452840 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
LINC01122-207ENST00000452840 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
LINC01122-207ENST00000452840 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
LINC01122-207ENST00000452840 TRIM41Q8WV44 630 aa18.95■□□□□ 0.62
LINC01122-207ENST00000452840 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
LINC01122-207ENST00000452840 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
LINC01122-207ENST00000452840 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
LINC01122-207ENST00000452840 MYT1Q01538 1121 aa18.72■□□□□ 0.59
LINC01122-207ENST00000452840 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
LINC01122-207ENST00000452840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
LINC01122-207ENST00000452840 ABCC9O60706 1549 aa18.69■□□□□ 0.58
LINC01122-207ENST00000452840 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
LINC01122-207ENST00000452840 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
LINC01122-207ENST00000452840 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
LINC01122-207ENST00000452840 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
LINC01122-207ENST00000452840 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
LINC01122-207ENST00000452840 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
LINC01122-207ENST00000452840 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
LINC01122-207ENST00000452840 YTHDC1Q96MU7 727 aaKnown RBP18.35■□□□□ 0.53
LINC01122-207ENST00000452840 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
LINC01122-207ENST00000452840 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
LINC01122-207ENST00000452840 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
LINC01122-207ENST00000452840 MIER1Q8N108 512 aa18.13■□□□□ 0.49
LINC01122-207ENST00000452840 WRNQ14191 1432 aaPredicted RBP eCLIP18.11■□□□□ 0.49
LINC01122-207ENST00000452840 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
LINC01122-207ENST00000452840 WIZO95785 1651 aa18.06■□□□□ 0.48
LINC01122-207ENST00000452840 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
LINC01122-207ENST00000452840 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
LINC01122-207ENST00000452840 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
LINC01122-207ENST00000452840 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
LINC01122-207ENST00000452840 ABCC8Q09428 1581 aa17.93■□□□□ 0.46
LINC01122-207ENST00000452840 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
LINC01122-207ENST00000452840 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
LINC01122-207ENST00000452840 SOGA1O94964 1423 aa17.91■□□□□ 0.46
LINC01122-207ENST00000452840 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
LINC01122-207ENST00000452840 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
LINC01122-207ENST00000452840 NACADO15069 1562 aa17.81■□□□□ 0.44
LINC01122-207ENST00000452840 EEA1Q15075 1411 aa17.8■□□□□ 0.44
LINC01122-207ENST00000452840 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
LINC01122-207ENST00000452840 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
LINC01122-207ENST00000452840 APLP2Q06481 763 aa17.78■□□□□ 0.44
LINC01122-207ENST00000452840 RUSC2Q8N2Y8 1516 aa17.78■□□□□ 0.44
LINC01122-207ENST00000452840 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
LINC01122-207ENST00000452840 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
LINC01122-207ENST00000452840 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
LINC01122-207ENST00000452840 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
LINC01122-207ENST00000452840 CLIP1P30622 1438 aa17.65■□□□□ 0.42
LINC01122-207ENST00000452840 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
LINC01122-207ENST00000452840 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
LINC01122-207ENST00000452840 CEP164Q9UPV0 1460 aa17.6■□□□□ 0.41
LINC01122-207ENST00000452840 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
LINC01122-207ENST00000452840 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
LINC01122-207ENST00000452840 DHX57Q6P158 1386 aaKnown RBP17.53■□□□□ 0.4
LINC01122-207ENST00000452840 BCANQ96GW7 911 aa17.52■□□□□ 0.39
LINC01122-207ENST00000452840 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
LINC01122-207ENST00000452840 BCL11AQ9H165 835 aa17.49■□□□□ 0.39
LINC01122-207ENST00000452840 KIF21BO75037 1637 aa17.48■□□□□ 0.39
LINC01122-207ENST00000452840 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
LINC01122-207ENST00000452840 FKBP8Q14318 412 aa17.42■□□□□ 0.38
LINC01122-207ENST00000452840 RAPGEF2Q9Y4G8 1499 aa17.41■□□□□ 0.38
LINC01122-207ENST00000452840 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
LINC01122-207ENST00000452840 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
LINC01122-207ENST00000452840 NEFLP07196 543 aa17.35■□□□□ 0.37
LINC01122-207ENST00000452840 ITGAEP38570 1179 aa17.35■□□□□ 0.37
LINC01122-207ENST00000452840 KANK4Q5T7N3 995 aaPredicted RBP17.34■□□□□ 0.37
LINC01122-207ENST00000452840 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
LINC01122-207ENST00000452840 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
LINC01122-207ENST00000452840 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
LINC01122-207ENST00000452840 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
LINC01122-207ENST00000452840 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.34
LINC01122-207ENST00000452840 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
LINC01122-207ENST00000452840 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
LINC01122-207ENST00000452840 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
LINC01122-207ENST00000452840 CUX2O14529 1486 aa17.16■□□□□ 0.34
LINC01122-207ENST00000452840 ANP32CO43423 234 aa17.13■□□□□ 0.33
LINC01122-207ENST00000452840 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
LINC01122-207ENST00000452840 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
LINC01122-207ENST00000452840 HIRIP3Q9BW71 556 aaPredicted RBP17.11■□□□□ 0.33
LINC01122-207ENST00000452840 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
LINC01122-207ENST00000452840 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
LINC01122-207ENST00000452840 PRXQ9BXM0 1461 aa17.09■□□□□ 0.33
LINC01122-207ENST00000452840 PPP1R15AO75807 674 aaPredicted RBP17.09■□□□□ 0.33
LINC01122-207ENST00000452840 CCER2I3L3R5 266 aa17.08■□□□□ 0.33
LINC01122-207ENST00000452840 MAPKBP1O60336 1514 aa17.08■□□□□ 0.32
LINC01122-207ENST00000452840 MSH5O43196 834 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms