RNA–Protein interactions for RNA: ENST00000435777.2

COL22A1-203, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene COL22A1, Length 4,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-203ENST00000435777 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
COL22A1-203ENST00000435777 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
COL22A1-203ENST00000435777 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
COL22A1-203ENST00000435777 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
COL22A1-203ENST00000435777 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
COL22A1-203ENST00000435777 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
COL22A1-203ENST00000435777 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
COL22A1-203ENST00000435777 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
COL22A1-203ENST00000435777 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
COL22A1-203ENST00000435777 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
COL22A1-203ENST00000435777 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
COL22A1-203ENST00000435777 HRCP23327 699 aa19.68■□□□□ 0.74
COL22A1-203ENST00000435777 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
COL22A1-203ENST00000435777 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
COL22A1-203ENST00000435777 APLP2Q06481 763 aa19.53■□□□□ 0.72
COL22A1-203ENST00000435777 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
COL22A1-203ENST00000435777 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
COL22A1-203ENST00000435777 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
COL22A1-203ENST00000435777 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
COL22A1-203ENST00000435777 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
COL22A1-203ENST00000435777 ABCC9O60706 1549 aa19.27■□□□□ 0.68
COL22A1-203ENST00000435777 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
COL22A1-203ENST00000435777 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
COL22A1-203ENST00000435777 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
COL22A1-203ENST00000435777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
COL22A1-203ENST00000435777 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL22A1-203ENST00000435777 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
COL22A1-203ENST00000435777 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
COL22A1-203ENST00000435777 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
COL22A1-203ENST00000435777 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
COL22A1-203ENST00000435777 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
COL22A1-203ENST00000435777 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
COL22A1-203ENST00000435777 ITGAEP38570 1179 aa18.74■□□□□ 0.59
COL22A1-203ENST00000435777 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
COL22A1-203ENST00000435777 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
COL22A1-203ENST00000435777 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
COL22A1-203ENST00000435777 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
COL22A1-203ENST00000435777 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
COL22A1-203ENST00000435777 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
COL22A1-203ENST00000435777 NEFLP07196 543 aa18.31■□□□□ 0.52
COL22A1-203ENST00000435777 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
COL22A1-203ENST00000435777 NACADO15069 1562 aa18.29■□□□□ 0.52
COL22A1-203ENST00000435777 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
COL22A1-203ENST00000435777 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
COL22A1-203ENST00000435777 NEUROD1Q13562 356 aa18.21■□□□□ 0.5
COL22A1-203ENST00000435777 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
COL22A1-203ENST00000435777 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
COL22A1-203ENST00000435777 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
COL22A1-203ENST00000435777 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
COL22A1-203ENST00000435777 CLIP1P30622 1438 aa18.08■□□□□ 0.48
COL22A1-203ENST00000435777 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
COL22A1-203ENST00000435777 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
COL22A1-203ENST00000435777 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
COL22A1-203ENST00000435777 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
COL22A1-203ENST00000435777 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
COL22A1-203ENST00000435777 EEA1Q15075 1411 aa18.04■□□□□ 0.48
COL22A1-203ENST00000435777 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
COL22A1-203ENST00000435777 SOGA1O94964 1423 aa18.01■□□□□ 0.47
COL22A1-203ENST00000435777 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
COL22A1-203ENST00000435777 TRIM52Q96A61 297 aa18■□□□□ 0.47
COL22A1-203ENST00000435777 MYT1Q01538 1121 aa17.95■□□□□ 0.46
COL22A1-203ENST00000435777 ABCC8Q09428 1581 aa17.93■□□□□ 0.46
COL22A1-203ENST00000435777 BCANQ96GW7 911 aa17.93■□□□□ 0.46
COL22A1-203ENST00000435777 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
COL22A1-203ENST00000435777 MIER1Q8N108 512 aa17.92■□□□□ 0.46
COL22A1-203ENST00000435777 WIZO95785 1651 aa17.92■□□□□ 0.46
COL22A1-203ENST00000435777 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
COL22A1-203ENST00000435777 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
COL22A1-203ENST00000435777 ANP32CO43423 234 aa17.86■□□□□ 0.45
COL22A1-203ENST00000435777 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
COL22A1-203ENST00000435777 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
COL22A1-203ENST00000435777 FBLN2P98095 1184 aa17.75■□□□□ 0.43
COL22A1-203ENST00000435777 ZNF326Q5BKZ1 582 aaKnown RBP17.75■□□□□ 0.43
COL22A1-203ENST00000435777 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
COL22A1-203ENST00000435777 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
COL22A1-203ENST00000435777 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
COL22A1-203ENST00000435777 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
COL22A1-203ENST00000435777 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
COL22A1-203ENST00000435777 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
COL22A1-203ENST00000435777 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
COL22A1-203ENST00000435777 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
COL22A1-203ENST00000435777 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
COL22A1-203ENST00000435777 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
COL22A1-203ENST00000435777 FKBP8Q14318 412 aa17.6■□□□□ 0.41
COL22A1-203ENST00000435777 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
COL22A1-203ENST00000435777 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
COL22A1-203ENST00000435777 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
COL22A1-203ENST00000435777 CLSPNQ9HAW4 1339 aa17.52■□□□□ 0.4
COL22A1-203ENST00000435777 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
COL22A1-203ENST00000435777 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
COL22A1-203ENST00000435777 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL22A1-203ENST00000435777 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
COL22A1-203ENST00000435777 CUX2O14529 1486 aa17.5■□□□□ 0.39
COL22A1-203ENST00000435777 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
COL22A1-203ENST00000435777 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
COL22A1-203ENST00000435777 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
COL22A1-203ENST00000435777 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
COL22A1-203ENST00000435777 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
COL22A1-203ENST00000435777 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
COL22A1-203ENST00000435777 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms