RNA–Protein interactions for RNA: ENST00000435777.2

COL22A1-203, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene COL22A1, Length 4,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-203ENST00000435777 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
COL22A1-203ENST00000435777 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
COL22A1-203ENST00000435777 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
COL22A1-203ENST00000435777 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
COL22A1-203ENST00000435777 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
COL22A1-203ENST00000435777 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
COL22A1-203ENST00000435777 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
COL22A1-203ENST00000435777 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
COL22A1-203ENST00000435777 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
COL22A1-203ENST00000435777 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
COL22A1-203ENST00000435777 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
COL22A1-203ENST00000435777 HRCP23327 699 aa19.68■□□□□ 0.74
COL22A1-203ENST00000435777 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
COL22A1-203ENST00000435777 TRIM26Q12899 539 aaPredicted RBP19.55■□□□□ 0.72
COL22A1-203ENST00000435777 APLP2Q06481 763 aa19.53■□□□□ 0.72
COL22A1-203ENST00000435777 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
COL22A1-203ENST00000435777 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
COL22A1-203ENST00000435777 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
COL22A1-203ENST00000435777 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
COL22A1-203ENST00000435777 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
COL22A1-203ENST00000435777 ABCC9O60706 1549 aa19.27■□□□□ 0.68
COL22A1-203ENST00000435777 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
COL22A1-203ENST00000435777 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
COL22A1-203ENST00000435777 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
COL22A1-203ENST00000435777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
COL22A1-203ENST00000435777 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL22A1-203ENST00000435777 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
COL22A1-203ENST00000435777 SCRIBQ14160 1630 aa18.93■□□□□ 0.62
COL22A1-203ENST00000435777 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
COL22A1-203ENST00000435777 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
COL22A1-203ENST00000435777 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
COL22A1-203ENST00000435777 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
COL22A1-203ENST00000435777 ITGAEP38570 1179 aa18.74■□□□□ 0.59
COL22A1-203ENST00000435777 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
COL22A1-203ENST00000435777 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
COL22A1-203ENST00000435777 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
COL22A1-203ENST00000435777 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
COL22A1-203ENST00000435777 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
COL22A1-203ENST00000435777 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
COL22A1-203ENST00000435777 NEFLP07196 543 aa18.31■□□□□ 0.52
COL22A1-203ENST00000435777 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
COL22A1-203ENST00000435777 NACADO15069 1562 aa18.29■□□□□ 0.52
COL22A1-203ENST00000435777 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
COL22A1-203ENST00000435777 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
COL22A1-203ENST00000435777 NEUROD1Q13562 356 aa18.21■□□□□ 0.5
COL22A1-203ENST00000435777 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
COL22A1-203ENST00000435777 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
COL22A1-203ENST00000435777 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
COL22A1-203ENST00000435777 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
COL22A1-203ENST00000435777 CLIP1P30622 1438 aa18.08■□□□□ 0.48
COL22A1-203ENST00000435777 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
COL22A1-203ENST00000435777 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
COL22A1-203ENST00000435777 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
COL22A1-203ENST00000435777 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
COL22A1-203ENST00000435777 WRNQ14191 1432 aaPredicted RBP eCLIP18.05■□□□□ 0.48
COL22A1-203ENST00000435777 EEA1Q15075 1411 aa18.04■□□□□ 0.48
COL22A1-203ENST00000435777 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
COL22A1-203ENST00000435777 SOGA1O94964 1423 aa18.01■□□□□ 0.47
COL22A1-203ENST00000435777 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
COL22A1-203ENST00000435777 TRIM52Q96A61 297 aa18■□□□□ 0.47
COL22A1-203ENST00000435777 MYT1Q01538 1121 aa17.95■□□□□ 0.46
COL22A1-203ENST00000435777 ABCC8Q09428 1581 aa17.93■□□□□ 0.46
COL22A1-203ENST00000435777 BCANQ96GW7 911 aa17.93■□□□□ 0.46
COL22A1-203ENST00000435777 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
COL22A1-203ENST00000435777 MIER1Q8N108 512 aa17.92■□□□□ 0.46
COL22A1-203ENST00000435777 WIZO95785 1651 aa17.92■□□□□ 0.46
COL22A1-203ENST00000435777 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
COL22A1-203ENST00000435777 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
COL22A1-203ENST00000435777 ANP32CO43423 234 aa17.86■□□□□ 0.45
COL22A1-203ENST00000435777 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
COL22A1-203ENST00000435777 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
COL22A1-203ENST00000435777 FBLN2P98095 1184 aa17.75■□□□□ 0.43
COL22A1-203ENST00000435777 ZNF326Q5BKZ1 582 aaKnown RBP17.75■□□□□ 0.43
COL22A1-203ENST00000435777 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
COL22A1-203ENST00000435777 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
COL22A1-203ENST00000435777 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
COL22A1-203ENST00000435777 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
COL22A1-203ENST00000435777 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
COL22A1-203ENST00000435777 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
COL22A1-203ENST00000435777 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
COL22A1-203ENST00000435777 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
COL22A1-203ENST00000435777 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
COL22A1-203ENST00000435777 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
COL22A1-203ENST00000435777 FKBP8Q14318 412 aa17.6■□□□□ 0.41
COL22A1-203ENST00000435777 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
COL22A1-203ENST00000435777 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
COL22A1-203ENST00000435777 SIN3AQ96ST3 1273 aa17.53■□□□□ 0.4
COL22A1-203ENST00000435777 CLSPNQ9HAW4 1339 aa17.52■□□□□ 0.4
COL22A1-203ENST00000435777 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
COL22A1-203ENST00000435777 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.4
COL22A1-203ENST00000435777 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL22A1-203ENST00000435777 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
COL22A1-203ENST00000435777 CUX2O14529 1486 aa17.5■□□□□ 0.39
COL22A1-203ENST00000435777 RAPGEF2Q9Y4G8 1499 aa17.49■□□□□ 0.39
COL22A1-203ENST00000435777 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
COL22A1-203ENST00000435777 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
COL22A1-203ENST00000435777 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
COL22A1-203ENST00000435777 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
COL22A1-203ENST00000435777 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
COL22A1-203ENST00000435777 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms