RNA–Protein interactions for RNA: ENST00000356341.7

PAK1-202, Transcript of p21 (RAC1) activated kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAK1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-202ENST00000356341 NISCHQ9Y2I1 1504 aa23.32■■□□□ 1.32
PAK1-202ENST00000356341 CCDC180Q9P1Z9 1646 aa20.9■□□□□ 0.94
PAK1-202ENST00000356341 HRCP23327 699 aa19.88■□□□□ 0.77
PAK1-202ENST00000356341 PPARGC1BQ86YN6 1023 aaKnown RBP19.76■□□□□ 0.75
PAK1-202ENST00000356341 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
PAK1-202ENST00000356341 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
PAK1-202ENST00000356341 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
PAK1-202ENST00000356341 MYO15BQ96JP2 1530 aa19.62■□□□□ 0.73
PAK1-202ENST00000356341 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
PAK1-202ENST00000356341 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
PAK1-202ENST00000356341 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
PAK1-202ENST00000356341 DCAF8L2P0C7V8 631 aa19.35■□□□□ 0.69
PAK1-202ENST00000356341 NACADO15069 1562 aa19.24■□□□□ 0.67
PAK1-202ENST00000356341 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
PAK1-202ENST00000356341 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
PAK1-202ENST00000356341 ABCC9O60706 1549 aa19.01■□□□□ 0.63
PAK1-202ENST00000356341 MYT1Q01538 1121 aa18.98■□□□□ 0.63
PAK1-202ENST00000356341 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
PAK1-202ENST00000356341 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
PAK1-202ENST00000356341 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
PAK1-202ENST00000356341 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
PAK1-202ENST00000356341 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
PAK1-202ENST00000356341 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
PAK1-202ENST00000356341 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
PAK1-202ENST00000356341 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
PAK1-202ENST00000356341 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
PAK1-202ENST00000356341 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
PAK1-202ENST00000356341 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.51
PAK1-202ENST00000356341 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
PAK1-202ENST00000356341 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
PAK1-202ENST00000356341 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
PAK1-202ENST00000356341 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
PAK1-202ENST00000356341 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
PAK1-202ENST00000356341 BAZ1AQ9NRL2 1556 aaPredicted RBP18.03■□□□□ 0.48
PAK1-202ENST00000356341 TTBK1Q5TCY1 1321 aaPredicted RBP17.94■□□□□ 0.46
PAK1-202ENST00000356341 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
PAK1-202ENST00000356341 DIEXFQ68CQ4 756 aaKnown RBP17.92■□□□□ 0.46
PAK1-202ENST00000356341 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
PAK1-202ENST00000356341 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
PAK1-202ENST00000356341 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
PAK1-202ENST00000356341 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
PAK1-202ENST00000356341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
PAK1-202ENST00000356341 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
PAK1-202ENST00000356341 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
PAK1-202ENST00000356341 PRKCSHP14314 528 aaPredicted RBP17.8■□□□□ 0.44
PAK1-202ENST00000356341 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
PAK1-202ENST00000356341 WIZO95785 1651 aa17.77■□□□□ 0.43
PAK1-202ENST00000356341 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
PAK1-202ENST00000356341 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
PAK1-202ENST00000356341 ANP32EQ9BTT0 268 aa17.69■□□□□ 0.42
PAK1-202ENST00000356341 CSRNP3Q8WYN3 585 aa17.67■□□□□ 0.42
PAK1-202ENST00000356341 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
PAK1-202ENST00000356341 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
PAK1-202ENST00000356341 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
PAK1-202ENST00000356341 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
PAK1-202ENST00000356341 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
PAK1-202ENST00000356341 MIER1Q8N108 512 aa17.48■□□□□ 0.39
PAK1-202ENST00000356341 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
PAK1-202ENST00000356341 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
PAK1-202ENST00000356341 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
PAK1-202ENST00000356341 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
PAK1-202ENST00000356341 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
PAK1-202ENST00000356341 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
PAK1-202ENST00000356341 UBTFP17480 764 aaKnown RBP17.28■□□□□ 0.36
PAK1-202ENST00000356341 APLP2Q06481 763 aa17.21■□□□□ 0.35
PAK1-202ENST00000356341 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
PAK1-202ENST00000356341 BCANQ96GW7 911 aa17.17■□□□□ 0.34
PAK1-202ENST00000356341 CFTRP13569 1480 aa17.15■□□□□ 0.34
PAK1-202ENST00000356341 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
PAK1-202ENST00000356341 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
PAK1-202ENST00000356341 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
PAK1-202ENST00000356341 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
PAK1-202ENST00000356341 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
PAK1-202ENST00000356341 MSH5O43196 834 aa16.96■□□□□ 0.31
PAK1-202ENST00000356341 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
PAK1-202ENST00000356341 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
PAK1-202ENST00000356341 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
PAK1-202ENST00000356341 CADPSQ9ULU8 1353 aa16.92■□□□□ 0.3
PAK1-202ENST00000356341 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
PAK1-202ENST00000356341 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
PAK1-202ENST00000356341 ITGAEP38570 1179 aa16.88■□□□□ 0.29
PAK1-202ENST00000356341 FKBP8Q14318 412 aa16.87■□□□□ 0.29
PAK1-202ENST00000356341 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
PAK1-202ENST00000356341 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
PAK1-202ENST00000356341 CCDC136Q96JN2 1154 aa16.83■□□□□ 0.29
PAK1-202ENST00000356341 KCNH8Q96L42 1107 aa16.83■□□□□ 0.28
PAK1-202ENST00000356341 DNMBPQ6XZF7 1577 aa16.82■□□□□ 0.28
PAK1-202ENST00000356341 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
PAK1-202ENST00000356341 WDR62O43379 1518 aa16.8■□□□□ 0.28
PAK1-202ENST00000356341 CUX1P39880 1505 aa16.79■□□□□ 0.28
PAK1-202ENST00000356341 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.27
PAK1-202ENST00000356341 NESP48681 1621 aa16.76■□□□□ 0.27
PAK1-202ENST00000356341 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
PAK1-202ENST00000356341 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
PAK1-202ENST00000356341 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
PAK1-202ENST00000356341 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
PAK1-202ENST00000356341 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
PAK1-202ENST00000356341 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
PAK1-202ENST00000356341 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
PAK1-202ENST00000356341 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms