Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC6A9P48067 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC6A9P48067 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SLC6A9P48067 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 MIR661-201ENST00000384842 89 ntBASIC13.4□□□□□ -0.26
SLC6A9P48067 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC6A9P48067 TPRX2P-201ENST00000535362 881 ntBASIC13.4□□□□□ -0.26
SLC6A9P48067 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.4□□□□□ -0.26
SLC6A9P48067 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
SLC6A9P48067 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC6A9P48067 AC004840.1-201ENST00000636359 365 ntBASIC13.4□□□□□ -0.26
SLC6A9P48067 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.4□□□□□ -0.26
SLC6A9P48067 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC6A9P48067 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC6A9P48067 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SLC6A9P48067 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC6A9P48067 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SLC6A9P48067 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
SLC6A9P48067 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
SLC6A9P48067 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
SLC6A9P48067 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 COX20P2-201ENST00000452636 358 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 AC004066.1-201ENST00000502488 802 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 DOC2GP-202ENST00000514950 1163 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SLC6A9P48067 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 SAMD11P1-201ENST00000571429 661 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
SLC6A9P48067 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 AC009118.2-201ENST00000613275 655 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 CLK3P2-201ENST00000427566 1453 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 AC092053.3-201ENST00000641308 4975 ntBASIC13.39□□□□□ -0.27
SLC6A9P48067 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC6A9P48067 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC6A9P48067 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC6A9P48067 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC6A9P48067 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms