Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.13e-6■■□□□ 13.5
U2AF2P26368 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.93■■■□□ 2.063e-6■■□□□ 13.5
U2AF2P26368 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.86■■■□□ 2.053e-6■■□□□ 13.5
U2AF2P26368 ARMC10-207ENST00000434153 805 ntTSL 525.9■■□□□ 1.743e-6■■□□□ 13.5
U2AF2P26368 ARMC10-201ENST00000306450 1668 ntTSL 521.71■■□□□ 1.073e-6■■□□□ 13.5
U2AF2P26368 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.83■□□□□ 0.933e-6■■□□□ 13.5
U2AF2P26368 ARMC10-206ENST00000431642 688 ntTSL 33.27□□□□□ -1.893e-6■■□□□ 13.5
U2AF2P26368 MTF2-209ENST00000487263 863 ntTSL 33.75□□□□□ -1.811e-7■■□□□ 13.5
U2AF2P26368 MTF2-208ENST00000476037 788 ntTSL 53.44□□□□□ -1.861e-7■■□□□ 13.5
U2AF2P26368 CTNND1-235ENST00000533189 498 ntTSL 311.56□□□□□ -0.565e-11■■□□□ 13.5
U2AF2P26368 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.62□□□□□ -1.994e-8■■□□□ 13.5
U2AF2P26368 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.6□□□□□ -1.351e-7■■□□□ 13.5
U2AF2P26368 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.11■■□□□ 1.132e-6■■□□□ 13.5
U2AF2P26368 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.112e-6■■□□□ 13.5
U2AF2P26368 USP10-208ENST00000563386 590 ntTSL 421.19■□□□□ 0.981e-11■■□□□ 13.5
U2AF2P26368 USP10-205ENST00000562743 888 ntTSL 220.41■□□□□ 0.861e-11■■□□□ 13.5
U2AF2P26368 USP10-203ENST00000562092 254 ntTSL 520.38■□□□□ 0.851e-11■■□□□ 13.5
U2AF2P26368 NDRG1-203ENST00000517331 584 ntTSL 517.66■□□□□ 0.422e-7■■□□□ 13.5
U2AF2P26368 USP10-204ENST00000562283 569 ntTSL 417.61■□□□□ 0.411e-11■■□□□ 13.5
U2AF2P26368 NDRG1-221ENST00000522377 1103 ntTSL 513.47□□□□□ -0.252e-7■■□□□ 13.5
U2AF2P26368 USP10-206ENST00000563023 574 ntTSL 46.19□□□□□ -1.421e-11■■□□□ 13.5
U2AF2P26368 USP10-213ENST00000566512 575 ntTSL 22.31□□□□□ -2.041e-11■■□□□ 13.5
U2AF2P26368 CHKB-210ENST00000484266 1401 ntTSL 237.28■■■■□ 3.561e-6■■□□□ 13.5
U2AF2P26368 CHKB-207ENST00000476289 1010 ntTSL 535.88■■■■□ 3.331e-6■■□□□ 13.5
U2AF2P26368 CHKB-205ENST00000468532 1052 ntTSL 534.79■■■■□ 3.161e-6■■□□□ 13.5
U2AF2P26368 CHKB-212ENST00000492582 2069 ntTSL 233.45■■■□□ 2.951e-6■■□□□ 13.5
U2AF2P26368 CHKB-208ENST00000479003 2114 ntTSL 231.73■■■□□ 2.671e-6■■□□□ 13.5
U2AF2P26368 CHKB-CPT1B-203ENST00000492556 4906 ntTSL 224.4■■□□□ 1.51e-6■■□□□ 13.5
U2AF2P26368 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.361e-6■■□□□ 13.5
U2AF2P26368 CHKB-209ENST00000481673 1856 ntTSL 1 (best)23.04■■□□□ 1.281e-6■■□□□ 13.5
U2AF2P26368 CHKB-204ENST00000465842 428 ntTSL 221.16■□□□□ 0.981e-6■■□□□ 13.5
U2AF2P26368 CHKB-202ENST00000463053 886 ntTSL 318.55■□□□□ 0.561e-6■■□□□ 13.5
U2AF2P26368 SH3D19-212ENST00000604440 555 ntTSL 49.85□□□□□ -0.831e-6■■□□□ 13.5
U2AF2P26368 SLMAP-204ENST00000416658 1570 ntTSL 1 (best)8.78□□□□□ -13e-6■■□□□ 13.5
U2AF2P26368 ATM-216ENST00000531525 1513 ntTSL 1 (best)5.83□□□□□ -1.489e-10■■□□□ 13.5
U2AF2P26368 TMF1-204ENST00000489370 372 ntTSL 51.97□□□□□ -2.094e-9■■□□□ 13.5
U2AF2P26368 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.057e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.544e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.584e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.64e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-204ENST00000355972 5542 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.614e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.634e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.654e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.744e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.784e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.84e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.854e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.65□□□□□ -0.864e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.874e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.94e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.974e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -14e-7■■□□□ 13.5
U2AF2P26368 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.024e-7■■□□□ 13.5
U2AF2P26368 ERBIN-206ENST00000503913 544 ntTSL 37.06□□□□□ -1.281e-6■■□□□ 13.5
U2AF2P26368 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC15.45■□□□□ 0.065e-8■■□□□ 13.5
U2AF2P26368 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC15.14■□□□□ 0.015e-8■■□□□ 13.5
U2AF2P26368 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC14.28□□□□□ -0.125e-8■■□□□ 13.5
U2AF2P26368 ABI1-204ENST00000376138 3503 ntTSL 1 (best) BASIC13.87□□□□□ -0.195e-8■■□□□ 13.5
U2AF2P26368 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC11.59□□□□□ -0.555e-8■■□□□ 13.5
U2AF2P26368 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.715e-8■■□□□ 13.5
U2AF2P26368 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.745e-8■■□□□ 13.5
U2AF2P26368 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC10.22□□□□□ -0.775e-8■■□□□ 13.5
U2AF2P26368 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.39□□□□□ -1.075e-8■■□□□ 13.5
U2AF2P26368 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.84□□□□□ -1.155e-8■■□□□ 13.5
U2AF2P26368 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.58□□□□□ -1.25e-8■■□□□ 13.5
U2AF2P26368 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.37□□□□□ -1.395e-8■■□□□ 13.5
U2AF2P26368 GPC3-203ENST00000406757 836 ntTSL 29.53□□□□□ -0.882e-8■■□□□ 13.5
U2AF2P26368 ZNF655-221ENST00000489320 671 ntTSL 218.64■□□□□ 0.573e-11■■□□□ 13.5
U2AF2P26368 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.762e-6■■□□□ 13.5
U2AF2P26368 CCT3-212ENST00000478640 583 ntTSL 212.47□□□□□ -0.412e-14■■□□□ 13.5
U2AF2P26368 CCT3-202ENST00000368256 1063 ntTSL 311.53□□□□□ -0.562e-14■■□□□ 13.5
U2AF2P26368 CCT3-208ENST00000415548 513 ntTSL 39.39□□□□□ -0.912e-14■■□□□ 13.5
U2AF2P26368 CCT3-215ENST00000496684 748 ntTSL 28.22□□□□□ -1.092e-14■■□□□ 13.5
U2AF2P26368 CCT3-216ENST00000533194 581 ntTSL 37.78□□□□□ -1.162e-14■■□□□ 13.5
U2AF2P26368 CCT3-207ENST00000413555 842 ntTSL 56.9□□□□□ -1.32e-14■■□□□ 13.5
U2AF2P26368 CCT3-214ENST00000490221 696 ntTSL 26.02□□□□□ -1.452e-14■■□□□ 13.5
U2AF2P26368 CCT3-209ENST00000446905 593 ntTSL 35.44□□□□□ -1.542e-14■■□□□ 13.5
U2AF2P26368 CCT3-210ENST00000463132 610 ntTSL 33.74□□□□□ -1.812e-14■■□□□ 13.5
U2AF2P26368 TTC19-204ENST00000470399 636 ntTSL 526.77■■□□□ 1.881e-7■■□□□ 13.5
U2AF2P26368 BZW2-209ENST00000437745 1711 ntTSL 1 (best)16.41■□□□□ 0.221e-7■■□□□ 13.5
U2AF2P26368 BZW2-210ENST00000438834 674 ntTSL 415.18■□□□□ 0.021e-7■■□□□ 13.5
U2AF2P26368 BZW2-204ENST00000415365 1405 ntTSL 1 (best)13.56□□□□□ -0.241e-7■■□□□ 13.5
U2AF2P26368 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC13.3□□□□□ -0.281e-7■■□□□ 13.5
U2AF2P26368 BZW2-211ENST00000446596 859 ntTSL 312.72□□□□□ -0.371e-7■■□□□ 13.5
U2AF2P26368 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.621e-7■■□□□ 13.5
U2AF2P26368 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC11.14□□□□□ -0.631e-7■■□□□ 13.5
U2AF2P26368 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC11.06□□□□□ -0.641e-7■■□□□ 13.5
U2AF2P26368 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.671e-7■■□□□ 13.5
U2AF2P26368 BZW2-208ENST00000436868 1784 ntTSL 59.96□□□□□ -0.821e-7■■□□□ 13.5
U2AF2P26368 BZW2-206ENST00000432311 800 ntTSL 39.88□□□□□ -0.831e-7■■□□□ 13.5
U2AF2P26368 BZW2-213ENST00000480517 2101 ntTSL 29.79□□□□□ -0.841e-7■■□□□ 13.5
U2AF2P26368 BZW2-205ENST00000430000 617 ntTSL 44.48□□□□□ -1.691e-7■■□□□ 13.5
U2AF2P26368 RPRD1B-204ENST00000471511 571 ntTSL 410.82□□□□□ -0.683e-10■■□□□ 13.5
U2AF2P26368 RPRD1B-205ENST00000484683 554 ntTSL 310.35□□□□□ -0.753e-10■■□□□ 13.5
U2AF2P26368 COPA-203ENST00000481040 578 ntTSL 34.29□□□□□ -1.722e-11■■□□□ 13.5
U2AF2P26368 AC013394.1-202ENST00000630790 4499 ntTSL 28.93□□□□□ -0.982e-7■■□□□ 13.4
U2AF2P26368 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.883e-6■■□□□ 13.4
U2AF2P26368 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.98□□□□□ -0.013e-6■■□□□ 13.4
U2AF2P26368 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.183e-6■■□□□ 13.4
U2AF2P26368 VDAC2-201ENST00000298468 931 ntTSL 57.07□□□□□ -1.283e-6■■□□□ 13.4
Retrieved 100 of 36,523 protein–RNA pairs in 247.3 ms