RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 AEBP2Q6ZN18 517 aaPredicted RBP34.64■■■■□ 3.14
SH3D19-212ENST00000604440 CHIC1Q5VXU3 224 aa32.91■■■□□ 2.86
SH3D19-212ENST00000604440 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
SH3D19-212ENST00000604440 PHF23Q9BUL5 403 aaPredicted RBP29.1■■■□□ 2.25
SH3D19-212ENST00000604440 FOXD1Q16676 465 aa27.5■■□□□ 1.99
SH3D19-212ENST00000604440 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
SH3D19-212ENST00000604440 PPP6R1Q9UPN7 881 aa25.75■■□□□ 1.71
SH3D19-212ENST00000604440 MSH5O43196 834 aa25.69■■□□□ 1.7
SH3D19-212ENST00000604440 PIAS4Q8N2W9 510 aaPredicted RBP25.69■■□□□ 1.7
SH3D19-212ENST00000604440 ADRA2BP18089 450 aa25.65■■□□□ 1.7
SH3D19-212ENST00000604440 POTEDQ86YR6 584 aa25.03■■□□□ 1.6
SH3D19-212ENST00000604440 MAPK8IP2Q13387 824 aaPredicted RBP23.54■■□□□ 1.36
SH3D19-212ENST00000604440 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
SH3D19-212ENST00000604440 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
SH3D19-212ENST00000604440 PPP4R3CPQ6ZMV5 832 aa23.05■■□□□ 1.28
SH3D19-212ENST00000604440 CNKSR2Q8WXI2 1034 aa22.61■■□□□ 1.21
SH3D19-212ENST00000604440 HOXD11P31277 338 aaPredicted RBP22.58■■□□□ 1.21
SH3D19-212ENST00000604440 RNF216Q9NWF9 866 aaPredicted RBP22.4■■□□□ 1.18
SH3D19-212ENST00000604440 DCAF8L1A6NGE4 600 aa22.38■■□□□ 1.17
SH3D19-212ENST00000604440 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
SH3D19-212ENST00000604440 CACNB1Q02641 598 aaPredicted RBP22■■□□□ 1.11
SH3D19-212ENST00000604440 RNF39Q9H2S5 420 aa21.96■■□□□ 1.11
SH3D19-212ENST00000604440 NPM3O75607 178 aaKnown RBP21.88■■□□□ 1.09
SH3D19-212ENST00000604440 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
SH3D19-212ENST00000604440 C1QBPQ07021 282 aaKnown RBP21.61■■□□□ 1.05
SH3D19-212ENST00000604440 KCNA4P22459 653 aa21.5■■□□□ 1.03
SH3D19-212ENST00000604440 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
SH3D19-212ENST00000604440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.023e-9■■□□□ 12.7
SH3D19-212ENST00000604440 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
SH3D19-212ENST00000604440 SLC4A2P04920 1241 aa20.9■□□□□ 0.94
SH3D19-212ENST00000604440 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
SH3D19-212ENST00000604440 CAPN15O75808 1086 aa20.65■□□□□ 0.9
SH3D19-212ENST00000604440 DSG3P32926 999 aa20.57■□□□□ 0.88
SH3D19-212ENST00000604440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.43■□□□□ 0.86
SH3D19-212ENST00000604440 HNRNPUL2Q1KMD3 747 aaKnown RBP20.43■□□□□ 0.86
SH3D19-212ENST00000604440 APLP2Q06481 763 aa20.41■□□□□ 0.86
SH3D19-212ENST00000604440 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.85
SH3D19-212ENST00000604440 SAMD1Q6SPF0 538 aaPredicted RBP20.33■□□□□ 0.85
SH3D19-212ENST00000604440 ZNF219Q9P2Y4 722 aaPredicted RBP20.33■□□□□ 0.85
SH3D19-212ENST00000604440 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
SH3D19-212ENST00000604440 MYCNP04198 464 aaPredicted RBP20.22■□□□□ 0.83
SH3D19-212ENST00000604440 ABCB7O75027 752 aa20.21■□□□□ 0.83
SH3D19-212ENST00000604440 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
SH3D19-212ENST00000604440 ZBTB22O15209 634 aa19.81■□□□□ 0.76
SH3D19-212ENST00000604440 POLA2Q14181 598 aa19.81■□□□□ 0.76
SH3D19-212ENST00000604440 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
SH3D19-212ENST00000604440 ABCC9O60706 1549 aa19.66■□□□□ 0.74
SH3D19-212ENST00000604440 POTEHQ6S545 545 aa19.61■□□□□ 0.73
SH3D19-212ENST00000604440 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
SH3D19-212ENST00000604440 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
SH3D19-212ENST00000604440 ZBTB12Q9Y330 459 aaPredicted RBP19.42■□□□□ 0.7
SH3D19-212ENST00000604440 ATXN8OSP0DMR3 200 aa19.41■□□□□ 0.7
SH3D19-212ENST00000604440 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
SH3D19-212ENST00000604440 CHRDL2Q6WN34 429 aa19.17■□□□□ 0.66
SH3D19-212ENST00000604440 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
SH3D19-212ENST00000604440 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
SH3D19-212ENST00000604440 FBLN2P98095 1184 aa18.94■□□□□ 0.62
SH3D19-212ENST00000604440 CSRNP3Q8WYN3 585 aa18.89■□□□□ 0.61
SH3D19-212ENST00000604440 MKRN4PQ13434 485 aaPredicted RBP18.88■□□□□ 0.61
SH3D19-212ENST00000604440 SPDYE2BA6NHP3 402 aa18.84■□□□□ 0.61
SH3D19-212ENST00000604440 SPDYE6P0CI01 402 aa18.84■□□□□ 0.61
SH3D19-212ENST00000604440 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
SH3D19-212ENST00000604440 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
SH3D19-212ENST00000604440 PIP4P2Q8N4L2 257 aa18.74■□□□□ 0.59
SH3D19-212ENST00000604440 RB1CC1Q8TDY2 1594 aa18.67■□□□□ 0.58
SH3D19-212ENST00000604440 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
SH3D19-212ENST00000604440 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
SH3D19-212ENST00000604440 SSUH2Q9Y2M2 353 aa18.63■□□□□ 0.57
SH3D19-212ENST00000604440 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
SH3D19-212ENST00000604440 NACADO15069 1562 aa18.48■□□□□ 0.55
SH3D19-212ENST00000604440 SPDYE1Q8NFV5 336 aaPredicted RBP18.48■□□□□ 0.55
SH3D19-212ENST00000604440 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
SH3D19-212ENST00000604440 SP7Q8TDD2 431 aaPredicted RBP18.41■□□□□ 0.54
SH3D19-212ENST00000604440 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
SH3D19-212ENST00000604440 HAX1O00165 279 aa18.33■□□□□ 0.52
SH3D19-212ENST00000604440 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
SH3D19-212ENST00000604440 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
SH3D19-212ENST00000604440 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
SH3D19-212ENST00000604440 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
SH3D19-212ENST00000604440 EVX2Q03828 476 aa18.16■□□□□ 0.5
SH3D19-212ENST00000604440 PRR29P0C7W0 189 aa18.13■□□□□ 0.49
SH3D19-212ENST00000604440 CHADLQ6NUI6 762 aa18.1■□□□□ 0.49
SH3D19-212ENST00000604440 C19orf67A6NJJ6 358 aa18.03■□□□□ 0.48
SH3D19-212ENST00000604440 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
SH3D19-212ENST00000604440 SPDYE4A6NLX3 237 aa17.96■□□□□ 0.47
SH3D19-212ENST00000604440 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
SH3D19-212ENST00000604440 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
SH3D19-212ENST00000604440 FARP1Q9Y4F1 1045 aaPredicted RBP17.83■□□□□ 0.44
SH3D19-212ENST00000604440 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
SH3D19-212ENST00000604440 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
SH3D19-212ENST00000604440 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
SH3D19-212ENST00000604440 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
SH3D19-212ENST00000604440 GABBR2O75899 941 aa17.74■□□□□ 0.43
SH3D19-212ENST00000604440 CREBZFQ9NS37 354 aa17.74■□□□□ 0.43
SH3D19-212ENST00000604440 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
SH3D19-212ENST00000604440 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
SH3D19-212ENST00000604440 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
SH3D19-212ENST00000604440 PROM2Q8N271 834 aa17.61■□□□□ 0.41
SH3D19-212ENST00000604440 ZNF579Q8NAF0 562 aaKnown RBP17.48■□□□□ 0.39
SH3D19-212ENST00000604440 MNX1P50219 401 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms