RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
CHKB-CPT1B-203ENST00000492556 DCAF8L2P0C7V8 631 aa35.24■■■■□ 3.23
CHKB-CPT1B-203ENST00000492556 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
CHKB-CPT1B-203ENST00000492556 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
CHKB-CPT1B-203ENST00000492556 PCGF6Q9BYE7 350 aa33.69■■■□□ 2.98
CHKB-CPT1B-203ENST00000492556 EHMT2Q96KQ7 1210 aa33.15■■■□□ 2.9
CHKB-CPT1B-203ENST00000492556 HRCP23327 699 aa33.03■■■□□ 2.88
CHKB-CPT1B-203ENST00000492556 ZEB1P37275 1124 aaPredicted RBP33.02■■■□□ 2.88
CHKB-CPT1B-203ENST00000492556 PELP1Q8IZL8 1130 aaKnown RBP32.89■■■□□ 2.86
CHKB-CPT1B-203ENST00000492556 FAM9AQ8IZU1 332 aaPredicted RBP32.8■■■□□ 2.84
CHKB-CPT1B-203ENST00000492556 CENPBP07199 599 aaPredicted RBP32.52■■■□□ 2.8
CHKB-CPT1B-203ENST00000492556 CHIC1Q5VXU3 224 aa32.52■■■□□ 2.8
CHKB-CPT1B-203ENST00000492556 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
CHKB-CPT1B-203ENST00000492556 TRIM26Q12899 539 aaPredicted RBP32.49■■■□□ 2.79
CHKB-CPT1B-203ENST00000492556 CCER1Q8TC90 406 aaPredicted RBP32.35■■■□□ 2.77
CHKB-CPT1B-203ENST00000492556 APLP2Q06481 763 aa32.25■■■□□ 2.75
CHKB-CPT1B-203ENST00000492556 TTBK1Q5TCY1 1321 aaPredicted RBP32.21■■■□□ 2.75
CHKB-CPT1B-203ENST00000492556 PPARGC1BQ86YN6 1023 aaKnown RBP32.21■■■□□ 2.75
CHKB-CPT1B-203ENST00000492556 LOC105371045A0A1W2PR82 267 aa32.13■■■□□ 2.73
CHKB-CPT1B-203ENST00000492556 MYT1Q01538 1121 aa32.1■■■□□ 2.73
CHKB-CPT1B-203ENST00000492556 YTHDC1Q96MU7 727 aaKnown RBP31.66■■■□□ 2.66
CHKB-CPT1B-203ENST00000492556 UBTFP17480 764 aaKnown RBP31.62■■■□□ 2.65
CHKB-CPT1B-203ENST00000492556 RANGAP1P46060 587 aaPredicted RBP31.4■■■□□ 2.62
CHKB-CPT1B-203ENST00000492556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.25■■■□□ 2.59
CHKB-CPT1B-203ENST00000492556 DIEXFQ68CQ4 756 aaKnown RBP31.24■■■□□ 2.59
CHKB-CPT1B-203ENST00000492556 ERICH6Q7L0X2 663 aa31.16■■■□□ 2.58
CHKB-CPT1B-203ENST00000492556 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.58
CHKB-CPT1B-203ENST00000492556 NEFLP07196 543 aa31.09■■■□□ 2.57
CHKB-CPT1B-203ENST00000492556 GTF3C3Q9Y5Q9 886 aa30.95■■■□□ 2.55
CHKB-CPT1B-203ENST00000492556 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
CHKB-CPT1B-203ENST00000492556 HNRNPUL2Q1KMD3 747 aaKnown RBP30.93■■■□□ 2.54
CHKB-CPT1B-203ENST00000492556 ACIN1Q9UKV3 1341 aaKnown RBP30.85■■■□□ 2.53
CHKB-CPT1B-203ENST00000492556 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
CHKB-CPT1B-203ENST00000492556 ATP1B4Q9UN42 357 aaPredicted RBP30.75■■■□□ 2.51
CHKB-CPT1B-203ENST00000492556 ZNF316A6NFI3 1004 aaPredicted RBP30.6■■■□□ 2.49
CHKB-CPT1B-203ENST00000492556 ITGAEP38570 1179 aa30.51■■■□□ 2.47
CHKB-CPT1B-203ENST00000492556 SCAF1Q9H7N4 1312 aaKnown RBP30.46■■■□□ 2.47
CHKB-CPT1B-203ENST00000492556 NEUROD1Q13562 356 aa30.29■■■□□ 2.44
CHKB-CPT1B-203ENST00000492556 CCDC180Q9P1Z9 1646 aa30.27■■■□□ 2.44
CHKB-CPT1B-203ENST00000492556 CSRNP3Q8WYN3 585 aa30.11■■■□□ 2.41
CHKB-CPT1B-203ENST00000492556 BCANQ96GW7 911 aa30■■■□□ 2.39
CHKB-CPT1B-203ENST00000492556 ABCC9O60706 1549 aa29.99■■■□□ 2.39
CHKB-CPT1B-203ENST00000492556 CLSPNQ9HAW4 1339 aa29.99■■■□□ 2.39
CHKB-CPT1B-203ENST00000492556 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
CHKB-CPT1B-203ENST00000492556 FAM50AQ14320 339 aaKnown RBP29.85■■■□□ 2.37
CHKB-CPT1B-203ENST00000492556 ANP32CO43423 234 aa29.8■■■□□ 2.36
CHKB-CPT1B-203ENST00000492556 RSF1Q96T23 1441 aaPredicted RBP29.77■■■□□ 2.36
CHKB-CPT1B-203ENST00000492556 POLR3GLQ9BT43 218 aa29.72■■■□□ 2.35
CHKB-CPT1B-203ENST00000492556 MIER1Q8N108 512 aa29.71■■■□□ 2.35
CHKB-CPT1B-203ENST00000492556 CDK11AQ9UQ88 783 aaPredicted RBP29.67■■■□□ 2.34
CHKB-CPT1B-203ENST00000492556 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.341e-6■■□□□ 13.8
CHKB-CPT1B-203ENST00000492556 DAXXQ9UER7 740 aaPredicted RBP29.62■■■□□ 2.33
CHKB-CPT1B-203ENST00000492556 RTL5Q5HYW3 569 aaPredicted RBP29.62■■■□□ 2.33
CHKB-CPT1B-203ENST00000492556 CNGB1Q14028 1251 aaPredicted RBP29.56■■■□□ 2.32
CHKB-CPT1B-203ENST00000492556 FKBP8Q14318 412 aa29.51■■■□□ 2.31
CHKB-CPT1B-203ENST00000492556 CEP162Q5TB80 1403 aa29.48■■■□□ 2.31
CHKB-CPT1B-203ENST00000492556 TRIM52Q96A61 297 aa29.42■■■□□ 2.3
CHKB-CPT1B-203ENST00000492556 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
CHKB-CPT1B-203ENST00000492556 EEA1Q15075 1411 aa29.36■■■□□ 2.29
CHKB-CPT1B-203ENST00000492556 CLIP1P30622 1438 aa29.32■■■□□ 2.28
CHKB-CPT1B-203ENST00000492556 DDX10Q13206 875 aaKnown RBP29.31■■■□□ 2.28
CHKB-CPT1B-203ENST00000492556 TNIKQ9UKE5 1360 aa29.3■■■□□ 2.28
CHKB-CPT1B-203ENST00000492556 GOLGA3Q08378 1498 aa29.27■■■□□ 2.28
CHKB-CPT1B-203ENST00000492556 TONSLQ96HA7 1378 aa29.13■■■□□ 2.25
CHKB-CPT1B-203ENST00000492556 P3H3Q8IVL6 736 aa29.12■■■□□ 2.25
CHKB-CPT1B-203ENST00000492556 HNRNPUQ00839 825 aaKnown RBP eCLIP29.1■■■□□ 2.25
CHKB-CPT1B-203ENST00000492556 ANP32AP39687 249 aaKnown RBP29.05■■■□□ 2.24
CHKB-CPT1B-203ENST00000492556 ANP32EQ9BTT0 268 aa29.05■■■□□ 2.24
CHKB-CPT1B-203ENST00000492556 MYT1LQ9UL68 1186 aa29.02■■■□□ 2.24
CHKB-CPT1B-203ENST00000492556 ZNF326Q5BKZ1 582 aaKnown RBP28.97■■■□□ 2.23
CHKB-CPT1B-203ENST00000492556 SUPT16HQ9Y5B9 1047 aaKnown RBP28.97■■■□□ 2.23
CHKB-CPT1B-203ENST00000492556 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
CHKB-CPT1B-203ENST00000492556 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
CHKB-CPT1B-203ENST00000492556 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
CHKB-CPT1B-203ENST00000492556 NACADO15069 1562 aa28.87■■■□□ 2.21
CHKB-CPT1B-203ENST00000492556 FAM9BQ8IZU0 186 aa28.82■■■□□ 2.2
CHKB-CPT1B-203ENST00000492556 SOGA1O94964 1423 aa28.81■■■□□ 2.2
CHKB-CPT1B-203ENST00000492556 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
CHKB-CPT1B-203ENST00000492556 HIRIP3Q9BW71 556 aaPredicted RBP28.79■■■□□ 2.2
CHKB-CPT1B-203ENST00000492556 IRX6P78412 446 aaPredicted RBP28.72■■■□□ 2.19
CHKB-CPT1B-203ENST00000492556 NPM2Q86SE8 214 aaKnown RBP28.72■■■□□ 2.19
CHKB-CPT1B-203ENST00000492556 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
CHKB-CPT1B-203ENST00000492556 MRS2Q9HD23 443 aa28.66■■■□□ 2.18
CHKB-CPT1B-203ENST00000492556 CCDC136Q96JN2 1154 aa28.65■■■□□ 2.18
CHKB-CPT1B-203ENST00000492556 VPS8Q8N3P4 1428 aa28.62■■■□□ 2.17
CHKB-CPT1B-203ENST00000492556 NBR1Q14596 966 aa28.61■■■□□ 2.17
CHKB-CPT1B-203ENST00000492556 ZBTB47Q9UFB7 747 aaPredicted RBP28.61■■■□□ 2.17
CHKB-CPT1B-203ENST00000492556 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
CHKB-CPT1B-203ENST00000492556 ABCC8Q09428 1581 aa28.58■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 ARID3CA6NKF2 412 aa28.57■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 SLC4A1APQ9BWU0 796 aaKnown RBP28.54■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 EIF4G2P78344 907 aaKnown RBP eCLIP28.54■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 MTUS2Q5JR59 1369 aa28.53■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 CCNB3Q8WWL7 1395 aa28.52■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
CHKB-CPT1B-203ENST00000492556 SIN3AQ96ST3 1273 aa28.49■■■□□ 2.15
CHKB-CPT1B-203ENST00000492556 KIF27Q86VH2 1401 aa28.47■■■□□ 2.15
CHKB-CPT1B-203ENST00000492556 TMC1Q8TDI8 760 aa28.46■■■□□ 2.15
CHKB-CPT1B-203ENST00000492556 TSHZ2Q9NRE2 1034 aa28.44■■■□□ 2.14
CHKB-CPT1B-203ENST00000492556 CCER2I3L3R5 266 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms