RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 NISCHQ9Y2I1 1504 aa22.35■■□□□ 1.17
RPRD1B-205ENST00000484683 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
RPRD1B-205ENST00000484683 ABCC9O60706 1549 aa19.65■□□□□ 0.74
RPRD1B-205ENST00000484683 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
RPRD1B-205ENST00000484683 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
RPRD1B-205ENST00000484683 NACADO15069 1562 aa18.79■□□□□ 0.6
RPRD1B-205ENST00000484683 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
RPRD1B-205ENST00000484683 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
RPRD1B-205ENST00000484683 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
RPRD1B-205ENST00000484683 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
RPRD1B-205ENST00000484683 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
RPRD1B-205ENST00000484683 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
RPRD1B-205ENST00000484683 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
RPRD1B-205ENST00000484683 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
RPRD1B-205ENST00000484683 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
RPRD1B-205ENST00000484683 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
RPRD1B-205ENST00000484683 CC2D2AQ9P2K1 1620 aa17.71■□□□□ 0.43
RPRD1B-205ENST00000484683 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
RPRD1B-205ENST00000484683 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
RPRD1B-205ENST00000484683 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
RPRD1B-205ENST00000484683 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
RPRD1B-205ENST00000484683 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
RPRD1B-205ENST00000484683 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
RPRD1B-205ENST00000484683 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
RPRD1B-205ENST00000484683 HMGXB3Q12766 1538 aa17.21■□□□□ 0.34
RPRD1B-205ENST00000484683 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
RPRD1B-205ENST00000484683 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
RPRD1B-205ENST00000484683 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
RPRD1B-205ENST00000484683 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
RPRD1B-205ENST00000484683 WIZO95785 1651 aa16.96■□□□□ 0.31
RPRD1B-205ENST00000484683 NESP48681 1621 aa16.91■□□□□ 0.3
RPRD1B-205ENST00000484683 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
RPRD1B-205ENST00000484683 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
RPRD1B-205ENST00000484683 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
RPRD1B-205ENST00000484683 CUX2O14529 1486 aa16.84■□□□□ 0.29
RPRD1B-205ENST00000484683 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
RPRD1B-205ENST00000484683 CFTRP13569 1480 aa16.71■□□□□ 0.27
RPRD1B-205ENST00000484683 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
RPRD1B-205ENST00000484683 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
RPRD1B-205ENST00000484683 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
RPRD1B-205ENST00000484683 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
RPRD1B-205ENST00000484683 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
RPRD1B-205ENST00000484683 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
RPRD1B-205ENST00000484683 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
RPRD1B-205ENST00000484683 WDR62O43379 1518 aa16.54■□□□□ 0.24
RPRD1B-205ENST00000484683 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.24
RPRD1B-205ENST00000484683 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
RPRD1B-205ENST00000484683 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
RPRD1B-205ENST00000484683 PRDM2Q13029 1718 aa16.4■□□□□ 0.22
RPRD1B-205ENST00000484683 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
RPRD1B-205ENST00000484683 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
RPRD1B-205ENST00000484683 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
RPRD1B-205ENST00000484683 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
RPRD1B-205ENST00000484683 SOGA1O94964 1423 aa16.21■□□□□ 0.19
RPRD1B-205ENST00000484683 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
RPRD1B-205ENST00000484683 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
RPRD1B-205ENST00000484683 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
RPRD1B-205ENST00000484683 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
RPRD1B-205ENST00000484683 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
RPRD1B-205ENST00000484683 CUX1P39880 1505 aa16.13■□□□□ 0.17
RPRD1B-205ENST00000484683 FBLN2P98095 1184 aa16.12■□□□□ 0.17
RPRD1B-205ENST00000484683 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
RPRD1B-205ENST00000484683 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
RPRD1B-205ENST00000484683 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
RPRD1B-205ENST00000484683 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
RPRD1B-205ENST00000484683 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
RPRD1B-205ENST00000484683 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
RPRD1B-205ENST00000484683 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
RPRD1B-205ENST00000484683 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
RPRD1B-205ENST00000484683 GAPVD1Q14C86 1478 aa15.99■□□□□ 0.15
RPRD1B-205ENST00000484683 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
RPRD1B-205ENST00000484683 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
RPRD1B-205ENST00000484683 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
RPRD1B-205ENST00000484683 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
RPRD1B-205ENST00000484683 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
RPRD1B-205ENST00000484683 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
RPRD1B-205ENST00000484683 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
RPRD1B-205ENST00000484683 CHD1O14646 1710 aa15.85■□□□□ 0.13
RPRD1B-205ENST00000484683 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
RPRD1B-205ENST00000484683 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
RPRD1B-205ENST00000484683 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
RPRD1B-205ENST00000484683 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
RPRD1B-205ENST00000484683 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
RPRD1B-205ENST00000484683 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
RPRD1B-205ENST00000484683 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
RPRD1B-205ENST00000484683 RIMBP3CA6NJZ7 1639 aa15.78■□□□□ 0.12
RPRD1B-205ENST00000484683 RIMBP3BA6NNM3 1639 aa15.78■□□□□ 0.12
RPRD1B-205ENST00000484683 RIMBP3Q9UFD9 1639 aa15.78■□□□□ 0.12
RPRD1B-205ENST00000484683 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
RPRD1B-205ENST00000484683 ADAMTS12P58397 1594 aa15.73■□□□□ 0.11
RPRD1B-205ENST00000484683 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
RPRD1B-205ENST00000484683 IGF1RP08069 1367 aa15.71■□□□□ 0.11
RPRD1B-205ENST00000484683 NUP160Q12769 1436 aa15.69■□□□□ 0.1
RPRD1B-205ENST00000484683 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
RPRD1B-205ENST00000484683 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
RPRD1B-205ENST00000484683 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
RPRD1B-205ENST00000484683 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
RPRD1B-205ENST00000484683 CUL7Q14999 1698 aa15.6■□□□□ 0.09
RPRD1B-205ENST00000484683 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
RPRD1B-205ENST00000484683 PRG4Q92954 1404 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms