RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
ATM-216ENST00000531525 CHIC1Q5VXU3 224 aa23.89■■□□□ 1.42
ATM-216ENST00000531525 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
ATM-216ENST00000531525 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
ATM-216ENST00000531525 FOXD1Q16676 465 aa19.37■□□□□ 0.69
ATM-216ENST00000531525 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
ATM-216ENST00000531525 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
ATM-216ENST00000531525 ADRA2BP18089 450 aa18.54■□□□□ 0.56
ATM-216ENST00000531525 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
ATM-216ENST00000531525 MSH5O43196 834 aa17.85■□□□□ 0.45
ATM-216ENST00000531525 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
ATM-216ENST00000531525 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
ATM-216ENST00000531525 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
ATM-216ENST00000531525 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
ATM-216ENST00000531525 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
ATM-216ENST00000531525 KCNA4P22459 653 aa16.56■□□□□ 0.24
ATM-216ENST00000531525 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.24
ATM-216ENST00000531525 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
ATM-216ENST00000531525 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
ATM-216ENST00000531525 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
ATM-216ENST00000531525 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
ATM-216ENST00000531525 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
ATM-216ENST00000531525 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
ATM-216ENST00000531525 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
ATM-216ENST00000531525 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
ATM-216ENST00000531525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.062e-8■□□□□ 10.5
ATM-216ENST00000531525 RNF39Q9H2S5 420 aa15.33■□□□□ 0.04
ATM-216ENST00000531525 ZBTB22O15209 634 aa15.27■□□□□ 0.03
ATM-216ENST00000531525 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
ATM-216ENST00000531525 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
ATM-216ENST00000531525 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
ATM-216ENST00000531525 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
ATM-216ENST00000531525 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0.01
ATM-216ENST00000531525 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
ATM-216ENST00000531525 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
ATM-216ENST00000531525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
ATM-216ENST00000531525 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
ATM-216ENST00000531525 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
ATM-216ENST00000531525 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
ATM-216ENST00000531525 APLP2Q06481 763 aa14.78□□□□□ -0.04
ATM-216ENST00000531525 CAPN15O75808 1086 aa14.73□□□□□ -0.05
ATM-216ENST00000531525 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
ATM-216ENST00000531525 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.06
ATM-216ENST00000531525 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
ATM-216ENST00000531525 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
ATM-216ENST00000531525 DSG3P32926 999 aa14.56□□□□□ -0.08
ATM-216ENST00000531525 ABCB7O75027 752 aa14.46□□□□□ -0.09
ATM-216ENST00000531525 POLA2Q14181 598 aa14.41□□□□□ -0.1
ATM-216ENST00000531525 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
ATM-216ENST00000531525 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
ATM-216ENST00000531525 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
ATM-216ENST00000531525 FBLN2P98095 1184 aa14.03□□□□□ -0.16
ATM-216ENST00000531525 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
ATM-216ENST00000531525 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
ATM-216ENST00000531525 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
ATM-216ENST00000531525 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
ATM-216ENST00000531525 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
ATM-216ENST00000531525 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
ATM-216ENST00000531525 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
ATM-216ENST00000531525 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
ATM-216ENST00000531525 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
ATM-216ENST00000531525 FKBP8Q14318 412 aa13.6□□□□□ -0.23
ATM-216ENST00000531525 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
ATM-216ENST00000531525 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
ATM-216ENST00000531525 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
ATM-216ENST00000531525 PROM2Q8N271 834 aa13.49□□□□□ -0.25
ATM-216ENST00000531525 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
ATM-216ENST00000531525 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
ATM-216ENST00000531525 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
ATM-216ENST00000531525 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
ATM-216ENST00000531525 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
ATM-216ENST00000531525 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
ATM-216ENST00000531525 NISCHQ9Y2I1 1504 aa13.2□□□□□ -0.3
ATM-216ENST00000531525 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
ATM-216ENST00000531525 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATM-216ENST00000531525 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
ATM-216ENST00000531525 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
ATM-216ENST00000531525 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
ATM-216ENST00000531525 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
ATM-216ENST00000531525 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
ATM-216ENST00000531525 POTEHQ6S545 545 aa13□□□□□ -0.33
ATM-216ENST00000531525 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
ATM-216ENST00000531525 MIER1Q8N108 512 aa12.96□□□□□ -0.33
ATM-216ENST00000531525 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
ATM-216ENST00000531525 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
ATM-216ENST00000531525 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
ATM-216ENST00000531525 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
ATM-216ENST00000531525 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
ATM-216ENST00000531525 ZBTB47Q9UFB7 747 aaPredicted RBP12.77□□□□□ -0.37
ATM-216ENST00000531525 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
ATM-216ENST00000531525 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
ATM-216ENST00000531525 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.38
ATM-216ENST00000531525 HAX1O00165 279 aa12.7□□□□□ -0.38
ATM-216ENST00000531525 NUBP1P53384 320 aa12.68□□□□□ -0.38
ATM-216ENST00000531525 EVX2Q03828 476 aa12.66□□□□□ -0.38
ATM-216ENST00000531525 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
ATM-216ENST00000531525 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
ATM-216ENST00000531525 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
ATM-216ENST00000531525 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
ATM-216ENST00000531525 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms