RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.25
CHKB-202ENST00000463053 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
CHKB-202ENST00000463053 ABCC9O60706 1549 aa37.03■■■■□ 3.52
CHKB-202ENST00000463053 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
CHKB-202ENST00000463053 NACADO15069 1562 aa35.09■■■■□ 3.21
CHKB-202ENST00000463053 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
CHKB-202ENST00000463053 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
CHKB-202ENST00000463053 DNAJC5BQ9UF47 199 aa34.65■■■■□ 3.14
CHKB-202ENST00000463053 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.133e-7■□□□□ 8.9
CHKB-202ENST00000463053 ZCCHC6Q5VYS8 1495 aaKnown RBP34.54■■■■□ 3.12
CHKB-202ENST00000463053 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
CHKB-202ENST00000463053 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
CHKB-202ENST00000463053 BICRAQ9NZM4 1560 aa34.32■■■■□ 3.09
CHKB-202ENST00000463053 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
CHKB-202ENST00000463053 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
CHKB-202ENST00000463053 CC2D2AQ9P2K1 1620 aa33.42■■■□□ 2.94
CHKB-202ENST00000463053 EIF4G1Q04637 1599 aaKnown RBP33.41■■■□□ 2.94
CHKB-202ENST00000463053 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
CHKB-202ENST00000463053 NCAPD3P42695 1498 aa32.45■■■□□ 2.79
CHKB-202ENST00000463053 ATAD2BQ9ULI0 1458 aa32.4■■■□□ 2.78
CHKB-202ENST00000463053 SMARCA4P51532 1647 aa32.39■■■□□ 2.78
CHKB-202ENST00000463053 SMARCA2P51531 1590 aa32.24■■■□□ 2.75
CHKB-202ENST00000463053 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
CHKB-202ENST00000463053 HMGXB3Q12766 1538 aa32.17■■■□□ 2.74
CHKB-202ENST00000463053 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
CHKB-202ENST00000463053 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
CHKB-202ENST00000463053 BAZ1BQ9UIG0 1483 aaKnown RBP32.05■■■□□ 2.72
CHKB-202ENST00000463053 NESP48681 1621 aa31.91■■■□□ 2.7
CHKB-202ENST00000463053 ERCC6Q03468 1493 aa31.88■■■□□ 2.69
CHKB-202ENST00000463053 CUX2O14529 1486 aa31.73■■■□□ 2.67
CHKB-202ENST00000463053 WIZO95785 1651 aa31.72■■■□□ 2.67
CHKB-202ENST00000463053 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
CHKB-202ENST00000463053 RSF1Q96T23 1441 aaPredicted RBP31.55■■■□□ 2.64
CHKB-202ENST00000463053 DNAJC5Q9H3Z4 198 aa31.54■■■□□ 2.64
CHKB-202ENST00000463053 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
CHKB-202ENST00000463053 THOC2Q8NI27 1593 aaKnown RBP31.46■■■□□ 2.63
CHKB-202ENST00000463053 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
CHKB-202ENST00000463053 KIF21AQ7Z4S6 1674 aa31.43■■■□□ 2.62
CHKB-202ENST00000463053 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
CHKB-202ENST00000463053 CFTRP13569 1480 aa31.17■■■□□ 2.58
CHKB-202ENST00000463053 MRC2Q9UBG0 1479 aa31.17■■■□□ 2.58
CHKB-202ENST00000463053 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
CHKB-202ENST00000463053 WDR62O43379 1518 aa31.08■■■□□ 2.57
CHKB-202ENST00000463053 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
CHKB-202ENST00000463053 CCDC88BA6NC98 1476 aa31.01■■■□□ 2.55
CHKB-202ENST00000463053 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
CHKB-202ENST00000463053 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
CHKB-202ENST00000463053 TOPBP1Q92547 1522 aa30.56■■■□□ 2.48
CHKB-202ENST00000463053 IFT140Q96RY7 1462 aa30.47■■■□□ 2.47
CHKB-202ENST00000463053 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
CHKB-202ENST00000463053 ABCC8Q09428 1581 aa30.44■■■□□ 2.46
CHKB-202ENST00000463053 DNMBPQ6XZF7 1577 aa30.43■■■□□ 2.46
CHKB-202ENST00000463053 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
CHKB-202ENST00000463053 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
CHKB-202ENST00000463053 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
CHKB-202ENST00000463053 TARBP1Q13395 1621 aaKnown RBP30.26■■■□□ 2.44
CHKB-202ENST00000463053 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
CHKB-202ENST00000463053 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.433e-8■■■■■ 28.1
CHKB-202ENST00000463053 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
CHKB-202ENST00000463053 RAD54L2Q9Y4B4 1467 aa30.2■■■□□ 2.43
CHKB-202ENST00000463053 SOGA1O94964 1423 aa30.14■■■□□ 2.42
CHKB-202ENST00000463053 CUX1P39880 1505 aa30.14■■■□□ 2.42
CHKB-202ENST00000463053 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
CHKB-202ENST00000463053 TDRD9Q8NDG6 1382 aaKnown RBP30.09■■■□□ 2.41
CHKB-202ENST00000463053 CHD1O14646 1710 aa29.96■■■□□ 2.39
CHKB-202ENST00000463053 FBLN2P98095 1184 aa29.95■■■□□ 2.39
CHKB-202ENST00000463053 RIMBP3CA6NJZ7 1639 aa29.94■■■□□ 2.38
CHKB-202ENST00000463053 RIMBP3BA6NNM3 1639 aa29.94■■■□□ 2.38
CHKB-202ENST00000463053 RIMBP3Q9UFD9 1639 aa29.94■■■□□ 2.38
CHKB-202ENST00000463053 SNAPC4Q5SXM2 1469 aa29.88■■■□□ 2.37
CHKB-202ENST00000463053 ARHGEF11O15085 1522 aa29.87■■■□□ 2.37
CHKB-202ENST00000463053 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
CHKB-202ENST00000463053 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
CHKB-202ENST00000463053 ABCA10Q8WWZ4 1543 aa29.77■■■□□ 2.36
CHKB-202ENST00000463053 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
CHKB-202ENST00000463053 GAPVD1Q14C86 1478 aa29.76■■■□□ 2.35
CHKB-202ENST00000463053 MAGI1Q96QZ7 1491 aaPredicted RBP29.76■■■□□ 2.35
CHKB-202ENST00000463053 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
CHKB-202ENST00000463053 CYB5RLQ6IPT4 315 aa29.7■■■□□ 2.35
CHKB-202ENST00000463053 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
CHKB-202ENST00000463053 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
CHKB-202ENST00000463053 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
CHKB-202ENST00000463053 PBRM1Q86U86 1689 aa29.68■■■□□ 2.34
CHKB-202ENST00000463053 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
CHKB-202ENST00000463053 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
CHKB-202ENST00000463053 CLASP1Q7Z460 1538 aa29.65■■■□□ 2.34
CHKB-202ENST00000463053 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
CHKB-202ENST00000463053 ADAMTS12P58397 1594 aa29.43■■■□□ 2.3
CHKB-202ENST00000463053 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
CHKB-202ENST00000463053 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
CHKB-202ENST00000463053 ERICH3Q5RHP9 1530 aa29.37■■■□□ 2.29
CHKB-202ENST00000463053 NUP160Q12769 1436 aa29.35■■■□□ 2.29
CHKB-202ENST00000463053 CEP170Q5SW79 1584 aa29.34■■■□□ 2.29
CHKB-202ENST00000463053 ERCC6L2Q5T890 1561 aa29.27■■■□□ 2.28
CHKB-202ENST00000463053 TRHP20396 242 aaPredicted RBP29.25■■■□□ 2.27
CHKB-202ENST00000463053 IGF1RP08069 1367 aa29.16■■■□□ 2.26
CHKB-202ENST00000463053 SHROOM2Q13796 1616 aa29.16■■■□□ 2.26
CHKB-202ENST00000463053 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
CHKB-202ENST00000463053 JPH4Q96JJ6 628 aa29.1■■■□□ 2.25
CHKB-202ENST00000463053 PRG4Q92954 1404 aaPredicted RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms