Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN22Q8N7P3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN22Q8N7P3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.2
CLDN22Q8N7P3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN22Q8N7P3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN22Q8N7P3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CICP17-201ENST00000418553 2377 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC055876.3-201ENST00000431496 288 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC092337.1-201ENST00000568699 1129 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC138649.4-201ENST00000612222 287 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC004790.1-201ENST00000612686 536 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC011474.4-201ENST00000623523 2076 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AC004840.1-201ENST00000636359 365 ntBASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN22Q8N7P3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN22Q8N7P3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms