Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CKS1BP61024 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
CKS1BP61024 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CKS1BP61024 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 MAPK10-262ENST00000641051 5738 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS1BP61024 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
CKS1BP61024 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 CRYGEP-201ENST00000412192 528 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 AC108751.1-201ENST00000490852 363 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS1BP61024 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS1BP61024 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS1BP61024 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.69□□□□□ -0.7
CKS1BP61024 AL445228.2-201ENST00000605589 952 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 AL078644.1-201ENST00000609881 752 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 PTPRVP-205ENST00000641549 5067 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
CKS1BP61024 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.69□□□□□ -0.7
CKS1BP61024 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CKS1BP61024 AC105250.1-201ENST00000509378 2057 ntBASIC10.69□□□□□ -0.7
CKS1BP61024 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.69□□□□□ -0.7
CKS1BP61024 AL589702.1-201ENST00000641229 1509 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
CKS1BP61024 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 AC090616.6-203ENST00000579186 1945 ntBASIC10.68□□□□□ -0.7
CKS1BP61024 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC10.68□□□□□ -0.7
CKS1BP61024 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CKS1BP61024 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms