Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATF1P18846 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ATF1P18846 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ATF1P18846 CICP8-201ENST00000455800 2813 ntBASIC13.31□□□□□ -0.28
ATF1P18846 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ATF1P18846 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.3□□□□□ -0.28
ATF1P18846 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 RPL13P2-201ENST00000440687 659 ntBASIC13.3□□□□□ -0.28
ATF1P18846 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 HLA-V-204ENST00000476601 1289 ntBASIC13.3□□□□□ -0.28
ATF1P18846 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.3□□□□□ -0.28
ATF1P18846 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 LINC01115-203ENST00000606068 577 ntBASIC13.3□□□□□ -0.28
ATF1P18846 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.3□□□□□ -0.28
ATF1P18846 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 AL359183.1-201ENST00000623796 2132 ntBASIC13.3□□□□□ -0.28
ATF1P18846 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.3□□□□□ -0.28
ATF1P18846 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ATF1P18846 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.29□□□□□ -0.28
ATF1P18846 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
ATF1P18846 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.29□□□□□ -0.28
ATF1P18846 KRT18P43-201ENST00000469825 1281 ntBASIC13.29□□□□□ -0.28
ATF1P18846 RN7SL618P-201ENST00000477850 296 ntBASIC13.29□□□□□ -0.28
ATF1P18846 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.29□□□□□ -0.28
ATF1P18846 AL512361.1-201ENST00000554200 418 ntBASIC13.29□□□□□ -0.28
ATF1P18846 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 AC074044.1-201ENST00000609673 707 ntBASIC13.29□□□□□ -0.28
ATF1P18846 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms