Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RCCD1A6NED2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.08■□□□□ 0.16
RCCD1A6NED2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AP006288.1-201ENST00000446065 395 ntBASIC16.07■□□□□ 0.16
RCCD1A6NED2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AC027369.6-201ENST00000525520 931 ntBASIC16.07■□□□□ 0.16
RCCD1A6NED2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.07■□□□□ 0.16
RCCD1A6NED2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 AC107918.4-201ENST00000641966 3141 ntBASIC16.07■□□□□ 0.16
RCCD1A6NED2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RCCD1A6NED2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.06■□□□□ 0.16
RCCD1A6NED2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.06■□□□□ 0.16
RCCD1A6NED2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms