Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 BHLHE23-202ENST00000612929 1109 ntBASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA9Q9Y5H5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 AC074183.2-201ENST00000623112 922 ntBASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA9Q9Y5H5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
PCDHA9Q9Y5H5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 AL033527.3-201ENST00000566366 1196 ntBASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA9Q9Y5H5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA9Q9Y5H5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHA9Q9Y5H5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.08■■□□□ 1.13
PCDHA9Q9Y5H5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.08■■□□□ 1.13
PCDHA9Q9Y5H5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHA9Q9Y5H5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
PCDHA9Q9Y5H5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 AC090877.2-201ENST00000558441 1738 ntBASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHA9Q9Y5H5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHA9Q9Y5H5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 AC022616.5-201ENST00000518796 181 ntBASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 PVT1_1.1-201ENST00000615125 194 ntBASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHA9Q9Y5H5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 AC010980.1-201ENST00000587192 1142 ntBASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDHA9Q9Y5H5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHA9Q9Y5H5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms