Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC12.71□□□□□ -0.37
SPTSSBQ8NFR3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SPTSSBQ8NFR3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.71□□□□□ -0.37
SPTSSBQ8NFR3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPTSSBQ8NFR3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPTSSBQ8NFR3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SPTSSBQ8NFR3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SPTSSBQ8NFR3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SPTSSBQ8NFR3 C1orf229-201ENST00000623686 2258 ntBASIC12.71□□□□□ -0.38
SPTSSBQ8NFR3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.71□□□□□ -0.38
SPTSSBQ8NFR3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 ERN1-208ENST00000606895 2068 ntBASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 AC092667.1-201ENST00000434301 2586 ntBASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SPTSSBQ8NFR3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SPTSSBQ8NFR3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 AC092803.2-201ENST00000564287 1899 ntBASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.68□□□□□ -0.38
SPTSSBQ8NFR3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SPTSSBQ8NFR3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SPTSSBQ8NFR3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SPTSSBQ8NFR3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms