Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 TRAP1-207ENST00000571804 781 ntTSL 525.66■■□□□ 1.79e-7■■■□□ 16.1
PHF6Q8IWS0 TRAP1-203ENST00000570403 521 ntTSL 425.59■■□□□ 1.699e-7■■■□□ 16.1
PHF6Q8IWS0 TRAP1-215ENST00000576106 555 ntTSL 425.58■■□□□ 1.699e-7■■■□□ 16.1
PHF6Q8IWS0 MAFG-203ENST00000574686 570 ntTSL 525.51■■□□□ 1.674e-6■■■□□ 16.1
PHF6Q8IWS0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.92■■□□□ 1.581e-8■■■□□ 16.1
PHF6Q8IWS0 TRAP1-205ENST00000571011 480 ntTSL 524.63■■□□□ 1.539e-7■■■□□ 16.1
PHF6Q8IWS0 ZEB2-221ENST00000479735 543 ntTSL 421.87■■□□□ 1.092e-10■■■□□ 16.1
PHF6Q8IWS0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.87■■□□□ 1.099e-7■■■□□ 16.1
PHF6Q8IWS0 TRAP1-211ENST00000574941 558 ntTSL 421.37■■□□□ 1.019e-7■■■□□ 16.1
PHF6Q8IWS0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.969e-7■■■□□ 16.1
PHF6Q8IWS0 PTMA-207ENST00000440384 222 ntTSL 320.93■□□□□ 0.941e-8■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-213ENST00000526842 535 ntTSL 520.75■□□□□ 0.919e-7■■■□□ 16.1
PHF6Q8IWS0 PPP2R3B-209ENST00000484364 732 ntTSL 220.33■□□□□ 0.859e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-216ENST00000487668 1040 ntTSL 520.04■□□□□ 0.89e-7■■■□□ 16.1
PHF6Q8IWS0 PPP2R3B-207ENST00000477636 519 ntTSL 520.02■□□□□ 0.89e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.78■□□□□ 0.769e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.02■□□□□ 0.649e-7■■■□□ 16.1
PHF6Q8IWS0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.69e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-220ENST00000494820 1098 ntTSL 518.65■□□□□ 0.589e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.569e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-206ENST00000444845 739 ntTSL 318.35■□□□□ 0.539e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.529e-7■■■□□ 16.1
PHF6Q8IWS0 MVD-209ENST00000565149 2352 ntTSL 1 (best)18.29■□□□□ 0.529e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-205ENST00000444256 426 ntTSL 517.93■□□□□ 0.469e-7■■■□□ 16.1
PHF6Q8IWS0 PPP2R3B-206ENST00000477110 5802 ntTSL 1 (best)17.68■□□□□ 0.429e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-215ENST00000487378 654 ntTSL 217.29■□□□□ 0.369e-7■■■□□ 16.1
PHF6Q8IWS0 PPP2R3B-204ENST00000468169 713 ntTSL 316.73■□□□□ 0.279e-7■■■□□ 16.1
PHF6Q8IWS0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.47■□□□□ 0.231e-8■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.179e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.83■□□□□ 0.129e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.059e-7■■■□□ 16.1
PHF6Q8IWS0 TRMT2A-213ENST00000480339 762 ntTSL 215.04■□□□□ -09e-7■■■□□ 16.1
PHF6Q8IWS0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.65□□□□□ -0.069e-7■■■□□ 16.1
PHF6Q8IWS0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.069e-7■■■□□ 16.1
PHF6Q8IWS0 MARCH6-203ENST00000502795 580 ntTSL 414.57□□□□□ -0.089e-7■■■□□ 16.1
PHF6Q8IWS0 MARCH6-209ENST00000510872 577 ntTSL 414.43□□□□□ -0.19e-7■■■□□ 16.1
PHF6Q8IWS0 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.289e-7■■■□□ 16.1
PHF6Q8IWS0 MVD-202ENST00000561895 499 ntTSL 213.03□□□□□ -0.329e-7■■■□□ 16.1
PHF6Q8IWS0 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.96□□□□□ -0.491e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.64□□□□□ -0.551e-8■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-221ENST00000534372 544 ntTSL 511.63□□□□□ -0.559e-7■■■□□ 16.1
PHF6Q8IWS0 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.44□□□□□ -0.581e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC11.15□□□□□ -0.621e-8■■■□□ 16.1
PHF6Q8IWS0 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC10.91□□□□□ -0.669e-7■■■□□ 16.1
PHF6Q8IWS0 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC10.79□□□□□ -0.681e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC10.68□□□□□ -0.71e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC10.56□□□□□ -0.721e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC10.55□□□□□ -0.721e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.741e-8■■■□□ 16.1
PHF6Q8IWS0 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC9.72□□□□□ -0.851e-8■■■□□ 16.1
PHF6Q8IWS0 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.39□□□□□ -0.919e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-219ENST00000531291 572 ntTSL 59.39□□□□□ -0.919e-7■■■□□ 16.1
PHF6Q8IWS0 SET-205ENST00000409104 962 ntTSL 5 BASIC9.27□□□□□ -0.939e-7■■■□□ 16.1
PHF6Q8IWS0 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.92□□□□□ -0.989e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-217ENST00000529361 555 ntTSL 58.56□□□□□ -1.049e-7■■■□□ 16.1
PHF6Q8IWS0 MARCH6-210ENST00000511802 4734 ntTSL 27.53□□□□□ -1.29e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-216ENST00000528968 587 ntTSL 57.15□□□□□ -1.269e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-202ENST00000399614 594 ntTSL 46.95□□□□□ -1.39e-7■■■□□ 16.1
PHF6Q8IWS0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.399e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-220ENST00000532325 526 ntTSL 56.35□□□□□ -1.399e-7■■■□□ 16.1
PHF6Q8IWS0 SET-202ENST00000372686 1029 ntTSL 26.18□□□□□ -1.429e-7■■■□□ 16.1
PHF6Q8IWS0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.31□□□□□ -1.569e-7■■■□□ 16.1
PHF6Q8IWS0 NAP1L4-204ENST00000448187 888 ntTSL 55.13□□□□□ -1.599e-7■■■□□ 16.1
PHF6Q8IWS0 SET-203ENST00000372688 801 ntTSL 2 BASIC5.11□□□□□ -1.599e-7■■■□□ 16.1
PHF6Q8IWS0 ZEB2-242ENST00000637591 101 ntTSL 53.82□□□□□ -1.82e-10■■■□□ 16.1
PHF6Q8IWS0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.431e-6■■■□□ 16.1
PHF6Q8IWS0 TAL1-204ENST00000464796 237 ntTSL 1 (best)10.27□□□□□ -0.771e-6■■■□□ 16.1
PHF6Q8IWS0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.18■□□□□ 0.186e-9■■■□□ 16.1
PHF6Q8IWS0 BCR-204ENST00000427791 771 ntTSL 1 (best)13.66□□□□□ -0.227e-7■■■□□ 16.1
PHF6Q8IWS0 SYNCRIP-203ENST00000444272 610 ntTSL 319.47■□□□□ 0.713e-6■■■□□ 15.9
PHF6Q8IWS0 FAM229A-202ENST00000416512 2759 ntTSL 1 (best)18.08■□□□□ 0.483e-6■■■□□ 15.9
PHF6Q8IWS0 FAM229A-201ENST00000415596 446 ntTSL 316.52■□□□□ 0.243e-6■■■□□ 15.9
PHF6Q8IWS0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.153e-6■■■□□ 15.9
PHF6Q8IWS0 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.473e-6■■■□□ 15.9
PHF6Q8IWS0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.014e-9■■■□□ 15.9
PHF6Q8IWS0 FASN-213ENST00000637693 100 ntTSL 59.81□□□□□ -0.841e-7■■■□□ 15.9
PHF6Q8IWS0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.36■□□□□ 0.692e-8■■■□□ 15.9
PHF6Q8IWS0 EIF4A1-207ENST00000578324 1577 ntTSL 515.39■□□□□ 0.055e-61■■■□□ 15.9
PHF6Q8IWS0 EIF4A1-228ENST00000583389 951 ntTSL 315.31■□□□□ 0.045e-61■■■□□ 15.9
PHF6Q8IWS0 SNORD10-201ENST00000459579 142 ntBASIC12.47□□□□□ -0.415e-61■■■□□ 15.9
PHF6Q8IWS0 EIF4A1-217ENST00000581384 642 ntTSL 510.34□□□□□ -0.755e-61■■■□□ 15.9
PHF6Q8IWS0 EIF4A1-204ENST00000577731 574 ntTSL 23.37□□□□□ -1.875e-61■■■□□ 15.9
PHF6Q8IWS0 SNORD111-201ENST00000408139 94 ntBASIC1.69□□□□□ -2.143e-38■■■□□ 15.9
PHF6Q8IWS0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.111e-6■■■□□ 15.8
PHF6Q8IWS0 TMC6-207ENST00000586697 571 ntTSL 416.87■□□□□ 0.299e-8■■■□□ 15.7
PHF6Q8IWS0 SNX5-206ENST00000469704 696 ntTSL 330.02■■■□□ 2.43e-39■■■□□ 15.6
PHF6Q8IWS0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.273e-39■■■□□ 15.6
PHF6Q8IWS0 SNX5-203ENST00000419004 778 ntTSL 520.1■□□□□ 0.813e-39■■■□□ 15.6
PHF6Q8IWS0 SNX5-204ENST00000431277 840 ntTSL 517.83■□□□□ 0.443e-39■■■□□ 15.6
PHF6Q8IWS0 OVOL2-204ENST00000486776 550 ntTSL 315.43■□□□□ 0.063e-39■■■□□ 15.6
PHF6Q8IWS0 SNX5-214ENST00000490175 2025 ntTSL 1 (best)15.38■□□□□ 0.053e-39■■■□□ 15.6
PHF6Q8IWS0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.073e-39■■■□□ 15.6
PHF6Q8IWS0 SNX5-207ENST00000474883 695 ntTSL 56.14□□□□□ -1.433e-39■■■□□ 15.6
PHF6Q8IWS0 SNORD17-201ENST00000390930 237 ntBASIC3.79□□□□□ -1.83e-39■■■□□ 15.6
PHF6Q8IWS0 ISYNA1-213ENST00000583534 629 ntTSL 1 (best)23.34■■□□□ 1.332e-8■■■□□ 15.6
PHF6Q8IWS0 ISYNA1-205ENST00000578352 592 ntTSL 222.07■■□□□ 1.122e-8■■■□□ 15.6
PHF6Q8IWS0 ISYNA1-208ENST00000581800 627 ntTSL 418.57■□□□□ 0.562e-8■■■□□ 15.6
PHF6Q8IWS0 TMC6-221ENST00000592063 743 ntTSL 516.75■□□□□ 0.276e-7■■■□□ 15.6
PHF6Q8IWS0 HSPG2-211ENST00000486901 3586 ntTSL 211.78□□□□□ -0.521e-6■■■□□ 15.6
PHF6Q8IWS0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.551e-67■■■□□ 15.5
Retrieved 100 of 4,170 protein–RNA pairs in 82.2 ms