RNA–Protein interactions for RNA: ENST00000570403.1

TRAP1-203, Transcript of TNF receptor associated protein 1, humanhuman

TSL 4

Gene TRAP1, Length 521 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-203ENST00000570403 NISCHQ9Y2I1 1504 aa56.07■■■■■ 6.57
TRAP1-203ENST00000570403 CCDC180Q9P1Z9 1646 aa50.13■■■■■ 5.62
TRAP1-203ENST00000570403 ABCC9O60706 1549 aa49.3■■■■■ 5.48
TRAP1-203ENST00000570403 RB1CC1Q8TDY2 1594 aa47.3■■■■■ 5.16
TRAP1-203ENST00000570403 NACADO15069 1562 aa47.14■■■■■ 5.14
TRAP1-203ENST00000570403 DCAF8L2P0C7V8 631 aa46.8■■■■■ 5.08
TRAP1-203ENST00000570403 MYO15BQ96JP2 1530 aa46.74■■■■■ 5.07
TRAP1-203ENST00000570403 ZCCHC6Q5VYS8 1495 aaKnown RBP46.66■■■■■ 5.06
TRAP1-203ENST00000570403 DCAF1Q9Y4B6 1507 aa46.4■■■■■ 5.02
TRAP1-203ENST00000570403 UNC13AQ9UPW8 1703 aa46.4■■■■■ 5.02
TRAP1-203ENST00000570403 BICRAQ9NZM4 1560 aa45.95■■■■■ 4.95
TRAP1-203ENST00000570403 PABPN1Q86U42 306 aaKnown RBP eCLIP45.92■■■■■ 4.94
TRAP1-203ENST00000570403 SCRIBQ14160 1630 aa45.66■■■■■ 4.9
TRAP1-203ENST00000570403 DNAJC5BQ9UF47 199 aa45.59■■■■■ 4.89
TRAP1-203ENST00000570403 SHROOM4Q9ULL8 1493 aa45.38■■■■■ 4.86
TRAP1-203ENST00000570403 EIF4G1Q04637 1599 aaKnown RBP44.73■■■■■ 4.75
TRAP1-203ENST00000570403 CC2D2AQ9P2K1 1620 aa44.65■■■■■ 4.74
TRAP1-203ENST00000570403 CECR2Q9BXF3 1484 aa44.34■■■■■ 4.69
TRAP1-203ENST00000570403 SMARCA4P51532 1647 aa43.65■■■■■ 4.58
TRAP1-203ENST00000570403 BAZ1AQ9NRL2 1556 aaPredicted RBP43.5■■■■■ 4.55
TRAP1-203ENST00000570403 NCAPD3P42695 1498 aa43.47■■■■■ 4.55
TRAP1-203ENST00000570403 ATAD2BQ9ULI0 1458 aa43.45■■■■■ 4.55
TRAP1-203ENST00000570403 SMARCA2P51531 1590 aa43.39■■■■■ 4.54
TRAP1-203ENST00000570403 HMGXB3Q12766 1538 aa43.28■■■■■ 4.52
TRAP1-203ENST00000570403 PEG3Q9GZU2 1588 aa43.24■■■■■ 4.51
TRAP1-203ENST00000570403 MROH2BQ7Z745 1585 aa43.22■■■■■ 4.51
TRAP1-203ENST00000570403 BAZ1BQ9UIG0 1483 aaKnown RBP43.06■■■■■ 4.48
TRAP1-203ENST00000570403 WIZO95785 1651 aa42.77■■■■■ 4.44
TRAP1-203ENST00000570403 NESP48681 1621 aa42.58■■■■■ 4.41
TRAP1-203ENST00000570403 RSF1Q96T23 1441 aaPredicted RBP42.54■■■■■ 4.4
TRAP1-203ENST00000570403 ERCC6Q03468 1493 aa42.5■■■■■ 4.39
TRAP1-203ENST00000570403 LAMC3Q9Y6N6 1575 aa42.44■■■■■ 4.39
TRAP1-203ENST00000570403 TOP2AP11388 1531 aaKnown RBP42.27■■■■■ 4.36
TRAP1-203ENST00000570403 CUX2O14529 1486 aa42.24■■■■■ 4.35
TRAP1-203ENST00000570403 KIF21AQ7Z4S6 1674 aa42.17■■■■■ 4.34
TRAP1-203ENST00000570403 CADPSQ9ULU8 1353 aa42.14■■■■■ 4.34
TRAP1-203ENST00000570403 THOC2Q8NI27 1593 aaKnown RBP42.11■■■■■ 4.33
TRAP1-203ENST00000570403 PDS5BQ9NTI5 1447 aa42.07■■■■■ 4.33
TRAP1-203ENST00000570403 CFTRP13569 1480 aa41.86■■■■■ 4.29
TRAP1-203ENST00000570403 MRC2Q9UBG0 1479 aa41.72■■■■■ 4.27
TRAP1-203ENST00000570403 CCDC88BA6NC98 1476 aa41.72■■■■■ 4.27
TRAP1-203ENST00000570403 FANCD2Q9BXW9 1451 aa41.71■■■■■ 4.27
TRAP1-203ENST00000570403 CEP164Q9UPV0 1460 aa41.7■■■■■ 4.27
TRAP1-203ENST00000570403 PRDM2Q13029 1718 aa41.69■■■■■ 4.26
TRAP1-203ENST00000570403 WDR62O43379 1518 aa41.65■■■■■ 4.26
TRAP1-203ENST00000570403 URB2Q14146 1524 aaKnown RBP41.35■■■■■ 4.21
TRAP1-203ENST00000570403 DNAJC5Q9H3Z4 198 aa41.34■■■■■ 4.21
TRAP1-203ENST00000570403 SUPT5HO00267 1087 aaKnown RBP41.03■■■■■ 4.16
TRAP1-203ENST00000570403 TOPBP1Q92547 1522 aa41.02■■■■■ 4.16
TRAP1-203ENST00000570403 DNMBPQ6XZF7 1577 aa40.95■■■■■ 4.15
TRAP1-203ENST00000570403 ABCC8Q09428 1581 aa40.94■■■■■ 4.14
TRAP1-203ENST00000570403 IFT140Q96RY7 1462 aa40.83■■■■■ 4.13
TRAP1-203ENST00000570403 ZNF608Q9ULD9 1512 aaPredicted RBP40.71■■■■■ 4.11
TRAP1-203ENST00000570403 TARBP1Q13395 1621 aaKnown RBP40.66■■■■■ 4.1
TRAP1-203ENST00000570403 POLA1P09884 1462 aaPredicted RBP40.64■■■■■ 4.1
TRAP1-203ENST00000570403 EIF4G3O43432 1585 aaKnown RBP40.6■■■■■ 4.09
TRAP1-203ENST00000570403 CUX1P39880 1505 aa40.57■■■■■ 4.09
TRAP1-203ENST00000570403 FGD5Q6ZNL6 1462 aa40.48■■■■■ 4.07
TRAP1-203ENST00000570403 RAD54L2Q9Y4B4 1467 aa40.45■■■■■ 4.07
TRAP1-203ENST00000570403 SOGA1O94964 1423 aa40.39■■■■■ 4.06
TRAP1-203ENST00000570403 AQRO60306 1485 aaKnown RBP eCLIP40.38■■■■■ 4.054e-6■■■■□ 20.4
TRAP1-203ENST00000570403 OSCARQ8IYS5 282 aa40.3■■■■■ 4.04
TRAP1-203ENST00000570403 WDR97A6NE52 1622 aa40.3■■■■■ 4.04
TRAP1-203ENST00000570403 TDRD9Q8NDG6 1382 aaKnown RBP40.22■■■■■ 4.03
TRAP1-203ENST00000570403 CHD1O14646 1710 aa40.2■■■■■ 4.03
TRAP1-203ENST00000570403 BIVM-ERCC5R4GMW8 1640 aa40.18■■■■■ 4.02
TRAP1-203ENST00000570403 TOP2BQ02880 1626 aa40.14■■■■■ 4.02
TRAP1-203ENST00000570403 SYNJ1O43426 1573 aa40.12■■■■■ 4.01
TRAP1-203ENST00000570403 WRNQ14191 1432 aaPredicted RBP eCLIP40.1■■■■■ 4.013e-7■■■■□ 25.1
TRAP1-203ENST00000570403 ABCA10Q8WWZ4 1543 aa40.07■■■■■ 4.01
TRAP1-203ENST00000570403 SNAPC4Q5SXM2 1469 aa40.04■■■■■ 4
TRAP1-203ENST00000570403 PBRM1Q86U86 1689 aa40.04■■■■■ 4
TRAP1-203ENST00000570403 ABCA5Q8WWZ7 1642 aa40.02■■■■■ 4
TRAP1-203ENST00000570403 GRIN2BQ13224 1484 aa40■■■■□ 3.99
TRAP1-203ENST00000570403 MAGI1Q96QZ7 1491 aaPredicted RBP39.97■■■■□ 3.99
TRAP1-203ENST00000570403 GAPVD1Q14C86 1478 aa39.95■■■■□ 3.99
TRAP1-203ENST00000570403 RIMBP3CA6NJZ7 1639 aa39.88■■■■□ 3.97
TRAP1-203ENST00000570403 RIMBP3BA6NNM3 1639 aa39.88■■■■□ 3.97
TRAP1-203ENST00000570403 RIMBP3Q9UFD9 1639 aa39.88■■■■□ 3.97
TRAP1-203ENST00000570403 FBLN2P98095 1184 aa39.87■■■■□ 3.97
TRAP1-203ENST00000570403 SYNJ2O15056 1496 aa39.81■■■■□ 3.96
TRAP1-203ENST00000570403 ARHGEF11O15085 1522 aa39.8■■■■□ 3.96
TRAP1-203ENST00000570403 TRIM41Q8WV44 630 aa39.76■■■■□ 3.96
TRAP1-203ENST00000570403 CHMP7Q8WUX9 453 aaPredicted RBP39.71■■■■□ 3.95
TRAP1-203ENST00000570403 CLASP1Q7Z460 1538 aa39.7■■■■□ 3.95
TRAP1-203ENST00000570403 ADAMTS12P58397 1594 aa39.65■■■■□ 3.94
TRAP1-203ENST00000570403 ERICH3Q5RHP9 1530 aa39.59■■■■□ 3.93
TRAP1-203ENST00000570403 GRIN2AQ12879 1464 aa39.52■■■■□ 3.92
TRAP1-203ENST00000570403 FHAD1B1AJZ9 1412 aa39.47■■■■□ 3.91
TRAP1-203ENST00000570403 ARAP1Q96P48 1450 aa39.45■■■■□ 3.91
TRAP1-203ENST00000570403 CEP170Q5SW79 1584 aa39.4■■■■□ 3.9
TRAP1-203ENST00000570403 NUP160Q12769 1436 aa39.37■■■■□ 3.89
TRAP1-203ENST00000570403 CYB5RLQ6IPT4 315 aa39.3■■■■□ 3.88
TRAP1-203ENST00000570403 KIF27Q86VH2 1401 aa39.27■■■■□ 3.88
TRAP1-203ENST00000570403 CUL7Q14999 1698 aa39.19■■■■□ 3.86
TRAP1-203ENST00000570403 SHROOM2Q13796 1616 aa39.19■■■■□ 3.86
TRAP1-203ENST00000570403 IGF1RP08069 1367 aa39.16■■■■□ 3.86
TRAP1-203ENST00000570403 ERCC6L2Q5T890 1561 aa39.12■■■■□ 3.85
TRAP1-203ENST00000570403 RUSC2Q8N2Y8 1516 aa39.09■■■■□ 3.85
TRAP1-203ENST00000570403 CARMIL1Q5VZK9 1371 aa38.9■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms