RNA–Protein interactions for RNA: ENST00000571011.1

TRAP1-205, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-205ENST00000571011 NISCHQ9Y2I1 1504 aa52.9■■■■■ 6.06
TRAP1-205ENST00000571011 CCDC180Q9P1Z9 1646 aa47.3■■■■■ 5.16
TRAP1-205ENST00000571011 ABCC9O60706 1549 aa47.01■■■■■ 5.12
TRAP1-205ENST00000571011 RB1CC1Q8TDY2 1594 aa44.9■■■■■ 4.78
TRAP1-205ENST00000571011 NACADO15069 1562 aa44.7■■■■■ 4.75
TRAP1-205ENST00000571011 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
TRAP1-205ENST00000571011 MYO15BQ96JP2 1530 aa44.23■■■■■ 4.67
TRAP1-205ENST00000571011 DNAJC5BQ9UF47 199 aa43.89■■■■■ 4.62
TRAP1-205ENST00000571011 ZCCHC6Q5VYS8 1495 aaKnown RBP43.89■■■■■ 4.62
TRAP1-205ENST00000571011 PABPN1Q86U42 306 aaKnown RBP eCLIP43.84■■■■■ 4.61
TRAP1-205ENST00000571011 UNC13AQ9UPW8 1703 aa43.82■■■■■ 4.6
TRAP1-205ENST00000571011 DCAF1Q9Y4B6 1507 aa43.75■■■■■ 4.59
TRAP1-205ENST00000571011 BICRAQ9NZM4 1560 aa43.58■■■■■ 4.57
TRAP1-205ENST00000571011 SHROOM4Q9ULL8 1493 aa43.09■■■■■ 4.49
TRAP1-205ENST00000571011 SCRIBQ14160 1630 aa43.08■■■■■ 4.49
TRAP1-205ENST00000571011 CC2D2AQ9P2K1 1620 aa42.49■■■■■ 4.39
TRAP1-205ENST00000571011 EIF4G1Q04637 1599 aaKnown RBP42.48■■■■■ 4.39
TRAP1-205ENST00000571011 CECR2Q9BXF3 1484 aa42.35■■■■■ 4.37
TRAP1-205ENST00000571011 NCAPD3P42695 1498 aa41.28■■■■■ 4.2
TRAP1-205ENST00000571011 ATAD2BQ9ULI0 1458 aa41.18■■■■■ 4.18
TRAP1-205ENST00000571011 SMARCA4P51532 1647 aa41.16■■■■■ 4.18
TRAP1-205ENST00000571011 SMARCA2P51531 1590 aa41.08■■■■■ 4.17
TRAP1-205ENST00000571011 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
TRAP1-205ENST00000571011 HMGXB3Q12766 1538 aa40.97■■■■■ 4.15
TRAP1-205ENST00000571011 PEG3Q9GZU2 1588 aa40.81■■■■■ 4.12
TRAP1-205ENST00000571011 BAZ1BQ9UIG0 1483 aaKnown RBP40.77■■■■■ 4.12
TRAP1-205ENST00000571011 MROH2BQ7Z745 1585 aa40.74■■■■■ 4.11
TRAP1-205ENST00000571011 ERCC6Q03468 1493 aa40.58■■■■■ 4.09
TRAP1-205ENST00000571011 NESP48681 1621 aa40.46■■■■■ 4.07
TRAP1-205ENST00000571011 CUX2O14529 1486 aa40.45■■■■■ 4.07
TRAP1-205ENST00000571011 LAMC3Q9Y6N6 1575 aa40.27■■■■■ 4.04
TRAP1-205ENST00000571011 WIZO95785 1651 aa40.22■■■■■ 4.03
TRAP1-205ENST00000571011 DNAJC5Q9H3Z4 198 aa40.14■■■■■ 4.02
TRAP1-205ENST00000571011 PDS5BQ9NTI5 1447 aa40.07■■■■■ 4
TRAP1-205ENST00000571011 CADPSQ9ULU8 1353 aa40.05■■■■■ 4
TRAP1-205ENST00000571011 RSF1Q96T23 1441 aaPredicted RBP40.03■■■■■ 4
TRAP1-205ENST00000571011 THOC2Q8NI27 1593 aaKnown RBP39.98■■■■□ 3.99
TRAP1-205ENST00000571011 KIF21AQ7Z4S6 1674 aa39.92■■■■□ 3.98
TRAP1-205ENST00000571011 TOP2AP11388 1531 aaKnown RBP39.78■■■■□ 3.96
TRAP1-205ENST00000571011 MRC2Q9UBG0 1479 aa39.66■■■■□ 3.94
TRAP1-205ENST00000571011 CFTRP13569 1480 aa39.64■■■■□ 3.94
TRAP1-205ENST00000571011 CEP164Q9UPV0 1460 aa39.56■■■■□ 3.92
TRAP1-205ENST00000571011 FANCD2Q9BXW9 1451 aa39.55■■■■□ 3.92
TRAP1-205ENST00000571011 WDR62O43379 1518 aa39.55■■■■□ 3.92
TRAP1-205ENST00000571011 CCDC88BA6NC98 1476 aa39.35■■■■□ 3.89
TRAP1-205ENST00000571011 URB2Q14146 1524 aaKnown RBP39.19■■■■□ 3.86
TRAP1-205ENST00000571011 PRDM2Q13029 1718 aa39.17■■■■□ 3.86
TRAP1-205ENST00000571011 TOPBP1Q92547 1522 aa38.83■■■■□ 3.81
TRAP1-205ENST00000571011 ABCC8Q09428 1581 aa38.82■■■■□ 3.8
TRAP1-205ENST00000571011 IFT140Q96RY7 1462 aa38.79■■■■□ 3.8
TRAP1-205ENST00000571011 DNMBPQ6XZF7 1577 aa38.7■■■■□ 3.79
TRAP1-205ENST00000571011 OSCARQ8IYS5 282 aa38.69■■■■□ 3.78
TRAP1-205ENST00000571011 ZNF608Q9ULD9 1512 aaPredicted RBP38.65■■■■□ 3.78
TRAP1-205ENST00000571011 SUPT5HO00267 1087 aaKnown RBP38.45■■■■□ 3.75
TRAP1-205ENST00000571011 POLA1P09884 1462 aaPredicted RBP38.45■■■■□ 3.75
TRAP1-205ENST00000571011 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
TRAP1-205ENST00000571011 EIF4G3O43432 1585 aaKnown RBP38.42■■■■□ 3.74
TRAP1-205ENST00000571011 TRIM41Q8WV44 630 aa38.41■■■■□ 3.74
TRAP1-205ENST00000571011 AQRO60306 1485 aaKnown RBP eCLIP38.36■■■■□ 3.734e-6■■■■□ 20.4
TRAP1-205ENST00000571011 SOGA1O94964 1423 aa38.31■■■■□ 3.72
TRAP1-205ENST00000571011 RAD54L2Q9Y4B4 1467 aa38.29■■■■□ 3.72
TRAP1-205ENST00000571011 CUX1P39880 1505 aa38.26■■■■□ 3.72
TRAP1-205ENST00000571011 FGD5Q6ZNL6 1462 aa38.23■■■■□ 3.71
TRAP1-205ENST00000571011 TDRD9Q8NDG6 1382 aaKnown RBP38.18■■■■□ 3.7
TRAP1-205ENST00000571011 WDR97A6NE52 1622 aa38.12■■■■□ 3.69
TRAP1-205ENST00000571011 CHD1O14646 1710 aa38.06■■■■□ 3.68
TRAP1-205ENST00000571011 RIMBP3CA6NJZ7 1639 aa38.05■■■■□ 3.68
TRAP1-205ENST00000571011 RIMBP3BA6NNM3 1639 aa38.05■■■■□ 3.68
TRAP1-205ENST00000571011 RIMBP3Q9UFD9 1639 aa38.05■■■■□ 3.68
TRAP1-205ENST00000571011 FBLN2P98095 1184 aa38.05■■■■□ 3.68
TRAP1-205ENST00000571011 ARHGEF11O15085 1522 aa37.99■■■■□ 3.67
TRAP1-205ENST00000571011 SNAPC4Q5SXM2 1469 aa37.96■■■■□ 3.67
TRAP1-205ENST00000571011 GRIN2BQ13224 1484 aa37.94■■■■□ 3.66
TRAP1-205ENST00000571011 MAGI1Q96QZ7 1491 aaPredicted RBP37.91■■■■□ 3.66
TRAP1-205ENST00000571011 ABCA10Q8WWZ4 1543 aa37.87■■■■□ 3.65
TRAP1-205ENST00000571011 CHMP7Q8WUX9 453 aaPredicted RBP37.85■■■■□ 3.65
TRAP1-205ENST00000571011 GAPVD1Q14C86 1478 aa37.84■■■■□ 3.65
TRAP1-205ENST00000571011 WRNQ14191 1432 aaPredicted RBP eCLIP37.78■■■■□ 3.643e-7■■■■□ 25.1
TRAP1-205ENST00000571011 SYNJ2O15056 1496 aa37.77■■■■□ 3.64
TRAP1-205ENST00000571011 ABCA5Q8WWZ7 1642 aa37.73■■■■□ 3.63
TRAP1-205ENST00000571011 CYB5RLQ6IPT4 315 aa37.73■■■■□ 3.63
TRAP1-205ENST00000571011 PBRM1Q86U86 1689 aa37.72■■■■□ 3.63
TRAP1-205ENST00000571011 TOP2BQ02880 1626 aa37.72■■■■□ 3.63
TRAP1-205ENST00000571011 BIVM-ERCC5R4GMW8 1640 aa37.71■■■■□ 3.63
TRAP1-205ENST00000571011 SYNJ1O43426 1573 aa37.7■■■■□ 3.63
TRAP1-205ENST00000571011 CLASP1Q7Z460 1538 aa37.69■■■■□ 3.62
TRAP1-205ENST00000571011 ARAP1Q96P48 1450 aa37.64■■■■□ 3.62
TRAP1-205ENST00000571011 GRIN2AQ12879 1464 aa37.43■■■■□ 3.58
TRAP1-205ENST00000571011 ADAMTS12P58397 1594 aa37.42■■■■□ 3.58
TRAP1-205ENST00000571011 ERICH3Q5RHP9 1530 aa37.39■■■■□ 3.58
TRAP1-205ENST00000571011 FHAD1B1AJZ9 1412 aa37.38■■■■□ 3.57
TRAP1-205ENST00000571011 NUP160Q12769 1436 aa37.32■■■■□ 3.56
TRAP1-205ENST00000571011 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
TRAP1-205ENST00000571011 TRHP20396 242 aaPredicted RBP37.19■■■■□ 3.54
TRAP1-205ENST00000571011 ERCC6L2Q5T890 1561 aa37.09■■■■□ 3.53
TRAP1-205ENST00000571011 SHROOM2Q13796 1616 aa37.08■■■■□ 3.53
TRAP1-205ENST00000571011 KIF27Q86VH2 1401 aa37.03■■■■□ 3.52
TRAP1-205ENST00000571011 IGF1RP08069 1367 aa37.02■■■■□ 3.52
TRAP1-205ENST00000571011 JPH4Q96JJ6 628 aa36.97■■■■□ 3.51
TRAP1-205ENST00000571011 PRG4Q92954 1404 aaPredicted RBP36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms